RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 EXPH5Q8NEV8 1989 aa13.98□□□□□ -0.17
TRIM28-205ENST00000595028 PCNX1Q96RV3 2341 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 A0A1B0GUH1 482 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 OR6C76A6NM76 312 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 ESPNB1AK53 854 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 H3BQF6 201 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 KLRC4-KLRK1H3BQV0 150 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 PCDH7O60245 1069 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 NADKO95544 446 aaPredicted RBP13.97□□□□□ -0.17
TRIM28-205ENST00000595028 CPA3P15088 417 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 XKP51811 444 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 FOXA1P55317 472 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 SLC37A1P57057 533 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 GPR85P60893 370 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 HMGCS1Q01581 520 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 IFFO1Q0D2I5 559 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 PCLAFQ15004 111 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 KRTCAP3Q53RY4 240 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 SPIN4Q56A73 249 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 CFAP157Q5JU67 520 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 LIPMQ5VYY2 423 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 OPN5Q6U736 354 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 RTL4Q6ZR62 310 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 SLC29A4Q7RTT9 530 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 FJX1Q86VR8 437 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 ZFP62Q8NB50 900 aaPredicted RBP13.97□□□□□ -0.17
TRIM28-205ENST00000595028 GOLM1Q8NBJ4 401 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 SLC22A8Q8TCC7 542 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 CHTF18Q8WVB6 975 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 MAGED4Q96JG8 741 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 FAIM2Q9BWQ8 316 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 WWTR1Q9GZV5 400 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 IQCGQ9H095 443 aaKnown RBP13.97□□□□□ -0.17
TRIM28-205ENST00000595028 DEPPQ9NTK1 212 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 CES1P1Q9UKY3 287 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 MTORP42345 2549 aa13.97□□□□□ -0.17
TRIM28-205ENST00000595028 ZNF407Q9C0G0 2248 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 A0A0G2JMM0 328 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 A0A1W2PPB8 328 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 A0A1W2PRS3 328 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 SERTM1A2A2V5 107 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 GOLGA6L10A6NI86 522 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 KIR3DP1A8MWS1 328 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 TFECO14948 347 aaPredicted RBP13.96□□□□□ -0.17
TRIM28-205ENST00000595028 SLC19A2O60779 497 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 PRF1P14222 555 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 SSTR4P31391 388 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 TIA1P31483 386 aaKnown RBP eCLIP13.96□□□□□ -0.17
TRIM28-205ENST00000595028 RFC3P40938 356 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 CA7P43166 264 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 RAE1P78406 368 aaKnown RBP13.96□□□□□ -0.17
TRIM28-205ENST00000595028 ACSM2AQ08AH3 577 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 FUT7Q11130 342 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 ERCC6LQ2NKX8 1250 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 ZNF750Q32MQ0 723 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 PIGGQ5H8A4 983 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 C6orf163Q5TEZ5 329 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 ACSM2BQ68CK6 577 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 GALNT18Q6P9A2 607 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 GHDCQ8N2G8 530 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 MREGQ8N565 214 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 BANPQ8N9N5 519 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 RELTQ969Z4 430 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 KLHL29Q96CT2 875 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 SPACA9Q96E40 222 aaPredicted RBP13.96□□□□□ -0.17
TRIM28-205ENST00000595028 APIPQ96GX9 242 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 SGCZQ96LD1 299 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 PLLPQ9Y342 182 aa13.96□□□□□ -0.17
TRIM28-205ENST00000595028 DNAJC13O75165 2243 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 TACC2O95359 2948 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 TRGV8A0A0C4DH27 118 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 GNG14A0A1W2PPG7 69 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 ASNA1O43681 348 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 CRCPO75575 148 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 ERAL1O75616 437 aaKnown RBP13.95□□□□□ -0.18
TRIM28-205ENST00000595028 ATP1B1P05026 303 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 IL3P08700 152 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 CT62P0C5K7 136 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 PORP16435 677 aaPredicted RBP13.95□□□□□ -0.18
TRIM28-205ENST00000595028 NT5EP21589 574 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 DEKP35659 375 aaKnown RBP13.95□□□□□ -0.18
TRIM28-205ENST00000595028 ALDH9A1P49189 494 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 KRTAP21-3Q3LHN1 58 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 SCIMPQ6UWF3 145 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 LYPD8Q6UX82 237 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 C10orf107Q8IVU9 208 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 SLC15A4Q8N697 577 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 ZNF441Q8N8Z8 693 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 OR2M7Q8NG81 312 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 C16orf52Q8NHV5 167 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 C11orf24Q96F05 449 aaPredicted RBP13.95□□□□□ -0.18
TRIM28-205ENST00000595028 ROPN1BQ9BZX4 212 aaPredicted RBP13.95□□□□□ -0.18
TRIM28-205ENST00000595028 ROPN1Q9HAT0 212 aaPredicted RBP13.95□□□□□ -0.18
TRIM28-205ENST00000595028 TNFRSF12AQ9NP84 129 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 RYDENQ9NUL5 291 aaKnown RBP13.95□□□□□ -0.18
TRIM28-205ENST00000595028 SIRT5Q9NXA8 310 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 HEY2Q9UBP5 337 aa13.95□□□□□ -0.18
TRIM28-205ENST00000595028 NCOA6Q14686 2063 aaPredicted RBP13.94□□□□□ -0.18
TRIM28-205ENST00000595028 PINLYPA6NC86 204 aa13.94□□□□□ -0.18
TRIM28-205ENST00000595028 G3V3Y1 287 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms