RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 SPPL2CQ8IUH8 684 aa16.06■□□□□ 0.16
IRF3-208ENST00000594387 C9orf40Q8IXQ3 194 aa16.06■□□□□ 0.16
IRF3-208ENST00000594387 OR7G1Q8NGA0 311 aa16.06■□□□□ 0.16
IRF3-208ENST00000594387 DOK4Q8TEW6 326 aa16.06■□□□□ 0.16
IRF3-208ENST00000594387 UCN3Q969E3 161 aa16.06■□□□□ 0.16
IRF3-208ENST00000594387 APOPT1Q96IL0 206 aa16.06■□□□□ 0.16
IRF3-208ENST00000594387 SMC6Q96SB8 1091 aa16.06■□□□□ 0.16
IRF3-208ENST00000594387 FAM173AQ9BQD7 235 aa16.06■□□□□ 0.16
IRF3-208ENST00000594387 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.06■□□□□ 0.16
IRF3-208ENST00000594387 V9GYY5 206 aaPredicted RBP16.06■□□□□ 0.16
IRF3-208ENST00000594387 FLNCQ14315 2725 aa16.06■□□□□ 0.16
IRF3-208ENST00000594387 SERTM1A2A2V5 107 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 ESPNB1AK53 854 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 HRKO00198 91 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 PRRG2O14669 202 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 TP53I11O14683 189 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 TRIM13O60858 407 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 TUBBP07437 444 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 RFC3P40938 356 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 CA7P43166 264 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 TMED10P49755 219 aaKnown RBP16.05■□□□□ 0.16
IRF3-208ENST00000594387 SLC37A1P57057 533 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 SLC22A16Q86VW1 577 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 SRRM1Q8IYB3 904 aaKnown RBP16.05■□□□□ 0.16
IRF3-208ENST00000594387 ZFP62Q8NB50 900 aaPredicted RBP16.05■□□□□ 0.16
IRF3-208ENST00000594387 FAM13CQ8NE31 585 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 OR2M7Q8NG81 312 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 C16orf52Q8NHV5 167 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 AENQ8WTP8 325 aaKnown RBP16.05■□□□□ 0.16
IRF3-208ENST00000594387 CAVIN3Q969G5 261 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 TP53INP1Q96A56 240 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 SPACA9Q96E40 222 aaPredicted RBP16.05■□□□□ 0.16
IRF3-208ENST00000594387 KCNA7Q96RP8 456 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 ACPTQ9BZG2 426 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 WWTR1Q9GZV5 400 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 OR10A5Q9H207 317 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 BCAP29Q9UHQ4 241 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 UTS2RQ9UKP6 389 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 DLGAP4Q9Y2H0 992 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 PLLPQ9Y342 182 aa16.05■□□□□ 0.16
IRF3-208ENST00000594387 EXPH5Q8NEV8 1989 aa16.04■□□□□ 0.16
IRF3-208ENST00000594387 HS6ST1O60243 411 aa16.04■□□□□ 0.16
IRF3-208ENST00000594387 ANXA4P09525 319 aaPredicted RBP16.04■□□□□ 0.16
IRF3-208ENST00000594387 UROSP10746 265 aa16.04■□□□□ 0.16
IRF3-208ENST00000594387 SSTR4P31391 388 aa16.04■□□□□ 0.16
IRF3-208ENST00000594387 TIA1P31483 386 aaKnown RBP eCLIP16.04■□□□□ 0.16
IRF3-208ENST00000594387 FEN1P39748 380 aaKnown RBP16.04■□□□□ 0.16
IRF3-208ENST00000594387 NR0B1P51843 470 aaKnown RBP16.04■□□□□ 0.16
IRF3-208ENST00000594387 PPIAP62937 165 aaKnown RBP16.04■□□□□ 0.16
IRF3-208ENST00000594387 RPP38P78345 283 aaKnown RBP16.04■□□□□ 0.16
IRF3-208ENST00000594387 HMGCS1Q01581 520 aa16.04■□□□□ 0.16
IRF3-208ENST00000594387 EBPQ15125 230 aaKnown RBP16.04■□□□□ 0.16
IRF3-208ENST00000594387 SCIMPQ6UWF3 145 aa16.04■□□□□ 0.16
IRF3-208ENST00000594387 TRABD2AQ86V40 505 aa16.04■□□□□ 0.16
IRF3-208ENST00000594387 SIAH3Q8IW03 269 aa16.04■□□□□ 0.16
IRF3-208ENST00000594387 LRRC25Q8N386 305 aaPredicted RBP16.04■□□□□ 0.16
IRF3-208ENST00000594387 VWA5B2Q8N398 1253 aa16.04■□□□□ 0.16
IRF3-208ENST00000594387 CDC26Q8NHZ8 85 aa16.04■□□□□ 0.16
IRF3-208ENST00000594387 TRMOQ9BU70 441 aa16.04■□□□□ 0.16
IRF3-208ENST00000594387 SHCBP1LQ9BZQ2 653 aa16.04■□□□□ 0.16
IRF3-208ENST00000594387 EML4Q9HC35 981 aaKnown RBP16.04■□□□□ 0.16
IRF3-208ENST00000594387 CNIH4Q9P003 139 aa16.04■□□□□ 0.16
IRF3-208ENST00000594387 ENTPD4Q9Y227 616 aa16.04■□□□□ 0.16
IRF3-208ENST00000594387 PTPN13Q12923 2485 aa16.04■□□□□ 0.16
IRF3-208ENST00000594387 FLNBO75369 2602 aaKnown RBP16.03■□□□□ 0.16
IRF3-208ENST00000594387 FREM3P0C091 2139 aa16.03■□□□□ 0.16
IRF3-208ENST00000594387 SPTBN1Q01082 2364 aaKnown RBP16.03■□□□□ 0.16
IRF3-208ENST00000594387 ZG16O60844 167 aa16.03■□□□□ 0.16
IRF3-208ENST00000594387 BCAS2O75934 225 aaPredicted RBP16.03■□□□□ 0.16
IRF3-208ENST00000594387 ATP1B1P05026 303 aa16.03■□□□□ 0.16
IRF3-208ENST00000594387 IL3P08700 152 aa16.03■□□□□ 0.16
IRF3-208ENST00000594387 CHN1P15882 459 aa16.03■□□□□ 0.16
IRF3-208ENST00000594387 HTR6P50406 440 aa16.03■□□□□ 0.16
IRF3-208ENST00000594387 SMSP52788 366 aa16.03■□□□□ 0.16
IRF3-208ENST00000594387 FUT7Q11130 342 aa16.03■□□□□ 0.16
IRF3-208ENST00000594387 MAP4K2Q12851 820 aa16.03■□□□□ 0.16
IRF3-208ENST00000594387 ERCC6LQ2NKX8 1250 aa16.03■□□□□ 0.16
IRF3-208ENST00000594387 C10orf107Q8IVU9 208 aa16.03■□□□□ 0.16
IRF3-208ENST00000594387 C16orf78Q8WTQ4 265 aa16.03■□□□□ 0.16
IRF3-208ENST00000594387 APIPQ96GX9 242 aa16.03■□□□□ 0.16
IRF3-208ENST00000594387 PARD6BQ9BYG5 372 aa16.03■□□□□ 0.16
IRF3-208ENST00000594387 C12orf65Q9H3J6 166 aaKnown RBP16.03■□□□□ 0.16
IRF3-208ENST00000594387 MKS1Q9NXB0 559 aa16.03■□□□□ 0.16
IRF3-208ENST00000594387 SENP1Q9P0U3 644 aa16.03■□□□□ 0.16
IRF3-208ENST00000594387 PRODH2Q9UF12 536 aa16.03■□□□□ 0.16
IRF3-208ENST00000594387 LGALS13Q9UHV8 139 aa16.03■□□□□ 0.16
IRF3-208ENST00000594387 CES1P1Q9UKY3 287 aa16.03■□□□□ 0.16
IRF3-208ENST00000594387 DNAJC13O75165 2243 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 G3V3Y1 287 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 SLC28A1O00337 649 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 UBFD1O14562 309 aaKnown RBP16.02■□□□□ 0.16
IRF3-208ENST00000594387 RGS14O43566 566 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 MPIP34949 423 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 PTGS2P35354 604 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 KCNJ2P63252 427 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 ZNF763Q0D2J5 394 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 C2orf80Q0P641 193 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 C3AR1Q16581 482 aa16.02■□□□□ 0.16
IRF3-208ENST00000594387 ZNF791Q3KP31 576 aaPredicted RBP16.02■□□□□ 0.16
IRF3-208ENST00000594387 RNFT1Q5M7Z0 435 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms