RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 ZNF791Q3KP31 576 aaPredicted RBP13.56□□□□□ -0.24
PNKP-202ENST00000593706 KHDRBS2Q5VWX1 349 aaKnown RBP13.56□□□□□ -0.24
PNKP-202ENST00000593706 FBXW10Q5XX13 1052 aa13.56□□□□□ -0.24
PNKP-202ENST00000593706 MED27Q6P2C8 311 aa13.56□□□□□ -0.24
PNKP-202ENST00000593706 ULK2Q8IYT8 1036 aa13.56□□□□□ -0.24
PNKP-202ENST00000593706 DND1Q8IYX4 353 aaKnown RBP13.56□□□□□ -0.24
PNKP-202ENST00000593706 OR7G3Q8NG95 312 aa13.56□□□□□ -0.24
PNKP-202ENST00000593706 GOT1L1Q8NHS2 421 aaPredicted RBP13.56□□□□□ -0.24
PNKP-202ENST00000593706 PAQR8Q8TEZ7 354 aa13.56□□□□□ -0.24
PNKP-202ENST00000593706 PPWD1Q96BP3 646 aaKnown RBP13.56□□□□□ -0.24
PNKP-202ENST00000593706 CMTM7Q96FZ5 175 aa13.56□□□□□ -0.24
PNKP-202ENST00000593706 ZNF597Q96LX8 424 aa13.56□□□□□ -0.24
PNKP-202ENST00000593706 DOHHQ9BU89 302 aa13.56□□□□□ -0.24
PNKP-202ENST00000593706 SORBS1Q9BX66 1292 aaKnown RBP13.56□□□□□ -0.24
PNKP-202ENST00000593706 CXXC4Q9H2H0 198 aa13.56□□□□□ -0.24
PNKP-202ENST00000593706 ZNF358Q9NW07 568 aa13.56□□□□□ -0.24
PNKP-202ENST00000593706 MS4A12Q9NXJ0 267 aa13.56□□□□□ -0.24
PNKP-202ENST00000593706 CRIM1Q9NZV1 1036 aa13.56□□□□□ -0.24
PNKP-202ENST00000593706 OPTCQ9UBM4 332 aa13.56□□□□□ -0.24
PNKP-202ENST00000593706 PHF11Q9UIL8 331 aa13.56□□□□□ -0.24
PNKP-202ENST00000593706 TSC22D4Q9Y3Q8 395 aa13.56□□□□□ -0.24
PNKP-202ENST00000593706 A0A087WUV0 522 aaPredicted RBP13.55□□□□□ -0.24
PNKP-202ENST00000593706 C15orf38-AP3S2A0A0A6YYH1 394 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 IQANK1A0A1B0GTG1 560 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 LRRC3CA6NJW4 275 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 HRKO00198 91 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 OR10H2O60403 315 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 IGKV3-11P04433 115 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 FAM153BP0C7A2 387 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 TLX1P31314 330 aaPredicted RBP13.55□□□□□ -0.24
PNKP-202ENST00000593706 ASCL1P50553 236 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 HERVK_113P63132 956 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 ERVK-8P63133 956 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 IGLV3-21P80748 117 aaPredicted RBP13.55□□□□□ -0.24
PNKP-202ENST00000593706 SLAMF1Q13291 335 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 BIKQ13323 160 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 FAM153CQ494X1 144 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 FLYWCH1Q4VC44 716 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 OR4C11Q6IEV9 310 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 GRHL2Q6ISB3 625 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 METTL2BQ6P1Q9 378 aaKnown RBP13.55□□□□□ -0.24
PNKP-202ENST00000593706 ADGRD1Q6QNK2 874 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 RNF111Q6ZNA4 994 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 MYLK4Q86YV6 388 aaPredicted RBP13.55□□□□□ -0.24
PNKP-202ENST00000593706 IFT20Q8IY31 132 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 LRRC25Q8N386 305 aaPredicted RBP13.55□□□□□ -0.24
PNKP-202ENST00000593706 TMEM151AQ8N4L1 468 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 SLC15A4Q8N697 577 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 OR10G3Q8NGC4 313 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 NEIL3Q8TAT5 605 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 ERVK-6Q9BXR3 956 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 WWTR1Q9GZV5 400 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 OR51B5Q9H339 312 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 LIME1Q9H400 295 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 L2HGDHQ9H9P8 463 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 SH2D2AQ9NP31 389 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 RASSF1Q9NS23 344 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 CNIH4Q9P003 139 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 ERVK-19Q9WJR5 959 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 PLEKHA6Q9Y2H5 1048 aa13.55□□□□□ -0.24
PNKP-202ENST00000593706 TRIM49D1C9J1S8 452 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 RIPK2O43353 540 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 PRKRAO75569 313 aaKnown RBP13.54□□□□□ -0.24
PNKP-202ENST00000593706 SIX3O95343 332 aaPredicted RBP13.54□□□□□ -0.24
PNKP-202ENST00000593706 SBK3P0C264 359 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 ALOX15P16050 662 aaPredicted RBP13.54□□□□□ -0.24
PNKP-202ENST00000593706 EPB42P16452 691 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 CNTFP26441 200 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 SERPINB3P29508 390 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 BUD31P41223 144 aaPredicted RBP13.54□□□□□ -0.24
PNKP-202ENST00000593706 DGKQP52824 942 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 KLC3Q6P597 504 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 DGAT2L6Q6ZPD8 337 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 TRMT10CQ7L0Y3 403 aaKnown RBP13.54□□□□□ -0.24
PNKP-202ENST00000593706 GPR180Q86V85 440 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 ST13P4Q8IZP2 240 aaPredicted RBP13.54□□□□□ -0.24
PNKP-202ENST00000593706 TEX9Q8N6V9 391 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 RELL2Q8NC24 303 aaPredicted RBP13.54□□□□□ -0.24
PNKP-202ENST00000593706 UHMK1Q8TAS1 419 aaKnown RBP13.54□□□□□ -0.24
PNKP-202ENST00000593706 DOK4Q8TEW6 326 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 TANKQ92844 425 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 RGMAQ96B86 450 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 PELOQ9BRX2 385 aaKnown RBP13.54□□□□□ -0.24
PNKP-202ENST00000593706 VPS11Q9H270 941 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 ACKR4Q9NPB9 350 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 DMRT3Q9NQL9 472 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 QPCTLQ9NXS2 382 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 XPR1Q9UBH6 696 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 PCDHGB3Q9Y5G1 929 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 CHCHD2Q9Y6H1 151 aaPredicted RBP13.54□□□□□ -0.24
PNKP-202ENST00000593706 ABCA2Q9BZC7 2435 aa13.54□□□□□ -0.24
PNKP-202ENST00000593706 A6NNC1 897 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 H0YIV9 168 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 UGDHO60701 494 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 FBXO45P0C2W1 286 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 RHOXF2BP0C7M4 288 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 COL6A2P12110 1019 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 GFAPP14136 432 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 TACR1P25103 407 aa13.53□□□□□ -0.24
PNKP-202ENST00000593706 PIK3CBP42338 1070 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms