RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 REXO5Q96IC2 774 aaKnown RBP12.65□□□□□ -0.38
VMP1-217ENST00000593168 SLC35A5Q9BS91 424 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 SPATA9Q9BWV2 254 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 EPS8L2Q9H6S3 715 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 CXorf36Q9H7Y0 433 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 SEMA3GQ9NS98 782 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 SIRT3Q9NTG7 399 aaPredicted RBP12.65□□□□□ -0.38
VMP1-217ENST00000593168 RARRES3Q9UL19 164 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 SRPK3Q9UPE1 567 aa12.65□□□□□ -0.38
VMP1-217ENST00000593168 MRPS33Q9Y291 106 aaKnown RBP12.65□□□□□ -0.38
VMP1-217ENST00000593168 COL27A1Q8IZC6 1860 aaPredicted RBP12.65□□□□□ -0.38
VMP1-217ENST00000593168 ELOVL7A1L3X0 281 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 FAM227AF5H4B4 570 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 CTNSO60931 367 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 FKBP6O75344 327 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 IL10P22301 178 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 ALAS2P22557 587 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 CCKBRP32239 447 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 CSTF2P33240 577 aaKnown RBP eCLIP12.64□□□□□ -0.39
VMP1-217ENST00000593168 FEN1P39748 380 aaKnown RBP12.64□□□□□ -0.39
VMP1-217ENST00000593168 MAGEA8P43361 318 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 CDK9P50750 372 aaKnown RBP12.64□□□□□ -0.39
VMP1-217ENST00000593168 MVDP53602 400 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 OR4D2P58180 307 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 HSPB3Q12988 150 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 FADDQ13158 208 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 RGNQ15493 299 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 PHF19Q5T6S3 580 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 ARHGAP40Q5TG30 622 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 CPZQ66K79 652 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 LCN8Q6JVE9 175 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 ERICH5Q6P6B1 374 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 AAGABQ6PD74 315 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 ZNF595Q8IYB9 648 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 CCDC116Q8IYX3 515 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 LRRC25Q8N386 305 aaPredicted RBP12.64□□□□□ -0.39
VMP1-217ENST00000593168 DTWD1Q8N5C7 304 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 AGBL5Q8NDL9 886 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 RCBTB1Q8NDN9 531 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 TMEM52Q8NDY8 209 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 OR51Q1Q8NH59 317 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 STMN2Q93045 179 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 MOAP1Q96BY2 351 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 TBC1D20Q96BZ9 403 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 NEURL3Q96EH8 262 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 OR6C1Q96RD1 312 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 TRIM15Q9C019 465 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 GPATCH2Q9NW75 528 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 SNX13Q9Y5W8 968 aa12.64□□□□□ -0.39
VMP1-217ENST00000593168 COL6A6A6NMZ7 2263 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 RNF103-CHMP3A0A140T963 221 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 A0A1B0GX78 115 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 AQP12BA6NM10 295 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 TMX2-CTNND1H3BSU7 103 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 CLDN4O14493 209 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 SLITRK5O94991 958 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 ATP6V1G2O95670 118 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 NTRK1P04629 796 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 IFI6P09912 130 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 C8orf89P0DMQ9 161 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 FGF5P12034 268 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 BMP2P12643 396 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 CPMP14384 443 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 PORP16435 677 aaPredicted RBP12.63□□□□□ -0.39
VMP1-217ENST00000593168 GPC1P35052 558 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 SOAT1P35610 550 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 CHI3L1P36222 383 aaPredicted RBP12.63□□□□□ -0.39
VMP1-217ENST00000593168 CCT3P49368 545 aaKnown RBP12.63□□□□□ -0.39
VMP1-217ENST00000593168 TMPRSS3P57727 454 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 MAT1AQ00266 395 aaKnown RBP12.63□□□□□ -0.39
VMP1-217ENST00000593168 RHDQ02161 417 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 FOLH1Q04609 750 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 DUSP2Q05923 314 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 DSG2Q14126 1118 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 LY6DQ14210 128 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 MAP7Q14244 749 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 IL11RAQ14626 422 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 ZNF750Q32MQ0 723 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 CDCP2Q5VXM1 449 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 FBXW10Q5XX13 1052 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 SAXO2Q658L1 398 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 GLYATQ6IB77 296 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 RHBDD2Q6NTF9 364 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 AQP12AQ8IXF9 295 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 MICU2Q8IYU8 434 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 CLEC4FQ8N1N0 589 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 C10orf111Q8N326 155 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 GOLM1Q8NBJ4 401 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 BHLHE22Q8NFJ8 381 aaPredicted RBP12.63□□□□□ -0.39
VMP1-217ENST00000593168 SFXN5Q8TD22 340 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 ANKRD9Q96BM1 317 aaPredicted RBP12.63□□□□□ -0.39
VMP1-217ENST00000593168 WBP1Q96G27 269 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 PEX11GQ96HA9 241 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 LRGUKQ96M69 825 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 ZNF578Q96N58 590 aaPredicted RBP12.63□□□□□ -0.39
VMP1-217ENST00000593168 CHST8Q9H2A9 424 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 PIF1Q9H611 641 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 DCLRE1BQ9H816 532 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 HCN3Q9P1Z3 774 aa12.63□□□□□ -0.39
VMP1-217ENST00000593168 NDOR1Q9UHB4 597 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms