RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 H3BQF6 201 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 SLC28A1O00337 649 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 TM9SF1O15321 606 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 BIRC5O15392 142 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 RSL1D1O76021 490 aaKnown RBP10.68□□□□□ -0.7
VMP1-211ENST00000591315 OR6B1O95007 311 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 ZWINTO95229 277 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 SERPINE1P05121 402 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 COX7A2P14406 83 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 PORP16435 677 aaPredicted RBP10.68□□□□□ -0.7
VMP1-211ENST00000591315 S1PR1P21453 382 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 MST1P26927 711 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 SOX3P41225 446 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 HLCSP50747 726 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 SLC37A1P57057 533 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 ABCE1P61221 599 aaKnown RBP10.68□□□□□ -0.7
VMP1-211ENST00000591315 TRA2BP62995 288 aaKnown RBP10.68□□□□□ -0.7
VMP1-211ENST00000591315 MRPS35P82673 323 aaKnown RBP10.68□□□□□ -0.7
VMP1-211ENST00000591315 EXOSC7Q15024 291 aaKnown RBP10.68□□□□□ -0.7
VMP1-211ENST00000591315 NR6A1Q15406 480 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 SPRED3Q2MJR0 410 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 GALNTL6Q49A17 601 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 TTMPQ5BVD1 217 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 HHATQ5VTY9 493 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 FAM71E1Q6IPT2 247 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 TMEM64Q6YI46 380 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 MDGA2Q7Z553 956 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 CROCCP2Q86T23 111 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 LGI4Q8N135 537 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 ZNF781Q8N8C0 355 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 PPP1R14CQ8TAE6 165 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 PPP1R36Q96LQ0 422 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 RASL10BQ96S79 203 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 BARD1Q99728 777 aaKnown RBP10.68□□□□□ -0.7
VMP1-211ENST00000591315 FAIM2Q9BWQ8 316 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 EML4Q9HC35 981 aaKnown RBP10.68□□□□□ -0.7
VMP1-211ENST00000591315 PNPOQ9NVS9 261 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 C1orf109Q9NX04 203 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 SIRT5Q9NXA8 310 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 MYOTQ9UBF9 498 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 UTS2RQ9UKP6 389 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 DTX4Q9Y2E6 619 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 PTPN13Q12923 2485 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 PCNX1Q96RV3 2341 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 HECTD1Q9ULT8 2610 aa10.68□□□□□ -0.7
VMP1-211ENST00000591315 MYO7BQ6PIF6 2116 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 G3V3Y1 287 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 LSM1O15116 133 aaKnown RBP10.67□□□□□ -0.7
VMP1-211ENST00000591315 ZNHIT1O43257 154 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 RGS14O43566 566 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 AKAP10O43572 662 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 PEX11AO75192 247 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 GUCY1B2O75343 617 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 LRATO95237 230 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 NADKO95544 446 aaPredicted RBP10.67□□□□□ -0.7
VMP1-211ENST00000591315 HSPA4LO95757 839 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 SP1P08047 785 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 PCSK2P16519 638 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 SDC1P18827 310 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 CSNK2A2P19784 350 aaPredicted RBP10.67□□□□□ -0.7
VMP1-211ENST00000591315 PRPH2P23942 346 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 TRHRP34981 398 aaPredicted RBP10.67□□□□□ -0.7
VMP1-211ENST00000591315 RFC3P40938 356 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 SLC1A6P48664 564 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 CYB561P49447 251 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 RPL38P63173 70 aaKnown RBP10.67□□□□□ -0.7
VMP1-211ENST00000591315 SRSF1Q07955 248 aaKnown RBP eCLIP10.67□□□□□ -0.7
VMP1-211ENST00000591315 ZNF763Q0D2J5 394 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 BST1Q10588 318 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 FUT7Q11130 342 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 PRICKLE4Q2TBC4 344 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 TRMT12Q53H54 448 aaKnown RBP10.67□□□□□ -0.7
VMP1-211ENST00000591315 ZNF385BQ569K4 471 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 XKR7Q5GH72 579 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 RNFT1Q5M7Z0 435 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 IL20RBQ6UXL0 311 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 RNF111Q6ZNA4 994 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 GALNTL5Q7Z4T8 443 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 TICAM1Q8IUC6 712 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 GALNT12Q8IXK2 581 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 CCDC116Q8IYX3 515 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 ZNF615Q8N8J6 731 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 OR9A2Q8NGT5 310 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 SUN3Q8TAQ9 357 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 KAT2AQ92830 837 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 SCMH1Q96GD3 660 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 FCRL1Q96LA6 429 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 TSSK3Q96PN8 268 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 GAL3ST4Q96RP7 486 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 BRINP2Q9C0B6 783 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 TSPAN10Q9H1Z9 355 aaPredicted RBP10.67□□□□□ -0.7
VMP1-211ENST00000591315 MYNNQ9NPC7 610 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 MAT2BQ9NZL9 334 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 ABI3Q9P2A4 366 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 COPS7AQ9UBW8 275 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 YARS2Q9Y2Z4 477 aaKnown RBP10.67□□□□□ -0.7
VMP1-211ENST00000591315 DNAJC13O75165 2243 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 GTF3C1Q12789 2109 aa10.67□□□□□ -0.7
VMP1-211ENST00000591315 SPTBN1Q01082 2364 aaKnown RBP10.67□□□□□ -0.7
VMP1-211ENST00000591315 FREM3P0C091 2139 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms