RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	LRRC74A	Q0VAA2	488 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	DGLUCY	Q7Z3D6	616 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	MICU2	Q8IYU8	434 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	ARL14	Q8N4G2	192 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	GRPEL2	Q8TAA5	225 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	NT5C	Q8TCD5	201 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	UCN3	Q969E3	161 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	FAM120B	Q96EK7	910 aa	Known RBP	14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	ZNF764	Q96H86	408 aa	Predicted RBP	14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	DACH2	Q96NX9	599 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	KCNC2	Q96PR1	638 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	GORASP2	Q9H8Y8	452 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	SLAMF7	Q9NQ25	335 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	MIEF1	Q9NQG6	463 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	PRELID1	Q9Y255	219 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	SCN3A	Q9NY46	2000 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	CACNA1E	Q15878	2313 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318		A0A0J9YY10	115 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	LMO7DN	F2Z398	122 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	P2RX6	O15547	441 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	FKBP9	O95302	570 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	SNAP29	O95721	258 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	CLIC3	O95833	236 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	BMP4	P12644	408 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	TYRP1	P17643	537 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	HIST1H1T	P22492	207 aa	Predicted RBP	14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	ATP5A1	P25705	553 aa	Known RBP	14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	AFF3	P51826	1226 aa	Known RBP	14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	VAC14	Q08AM6	782 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	SIGLEC14	Q08ET2	396 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	C19orf57	Q0VDD7	668 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	HEPACAM	Q14CZ8	416 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	FAM180B	Q6P0A1	224 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	SERPINA11	Q86U17	422 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	OOSP2	Q86WS3	158 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	CLEC4F	Q8N1N0	589 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	ASCC1	Q8N9N2	400 aa	Known RBP	14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	KCT2	Q8NC54	265 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	OR4A15	Q8NGL6	344 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	OR8K5	Q8NH50	307 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	BAHD1	Q8TBE0	780 aa	Predicted RBP	14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	TTC9	Q92623	222 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	REXO5	Q96IC2	774 aa	Known RBP	14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	TPT1P8	Q9HAU6	139 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	DIABLO	Q9NR28	239 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	UCKL1	Q9NWZ5	548 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	POMT2	Q9UKY4	750 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	ASB4	Q9Y574	426 aa		14.56	□□□□□ -0.08
DDX39A-209	ENST00000589318	ZNF99	A8MXY4	864 aa	Predicted RBP	14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	SH3BP5	O60239	455 aa		14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	SDC3	O75056	442 aa		14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	PIAS2	O75928	621 aa		14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	SCEL	O95171	688 aa		14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	CASP3	P42574	277 aa		14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	FRK	P42685	505 aa	Predicted RBP	14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	MVD	P53602	400 aa		14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	MAPK10	P53779	464 aa		14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	CYP51A1	Q16850	503 aa		14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	WDR45B	Q5MNZ6	344 aa		14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	ASPG	Q86U10	573 aa		14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	ACOT4	Q8N9L9	421 aa		14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	MUS81	Q96NY9	551 aa		14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	NECAB3	Q96P71	396 aa	Predicted RBP	14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	CHST8	Q9H2A9	424 aa		14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	EPS8L2	Q9H6S3	715 aa		14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	UCK1	Q9HA47	277 aa		14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	GPATCH2	Q9NW75	528 aa		14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	C5AR2	Q9P296	337 aa		14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	PCDH15	Q96QU1	1955 aa		14.55	□□□□□ -0.08
DDX39A-209	ENST00000589318	FAM149A	A5PLN7	773 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	NADK	O95544	446 aa	Predicted RBP	14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	ANXA6	P08133	673 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	TSFM	P43897	325 aa	Known RBP	14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	YAP1	P46937	504 aa	Known RBP	14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	RAB8A	P61006	207 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	STXBP1	P61764	594 aa	Known RBP	14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	DAG1	Q14118	895 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	DEFB133	Q30KQ1	61 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	FRMPD2B	Q6IN97	320 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	TRIM40	Q6P9F5	258 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	OGFOD3	Q6PK18	319 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	RNF44	Q7L0R7	432 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	ZBTB46	Q86UZ6	589 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	BPHL	Q86WA6	291 aa	Predicted RBP	14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	PTOV1	Q86YD1	416 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	OR52E4	Q8NGH9	312 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	GAL3ST3	Q96A11	431 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	NSMCE2	Q96MF7	247 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	ZFYVE21	Q9BQ24	234 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	TAS2R9	Q9NYW1	312 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	ZNF282	Q9UDV7	671 aa	Predicted RBP	14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	VPS4A	Q9UN37	437 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	A3GALT2	U3KPV4	340 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	LOC105369274	A0A096LPK9	316 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	LOC102723532	A0A0G2JNH3	316 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318		A0A1B0GVT2	93 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318		A0A1W2PRB8	838 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	CXCR6	O00574	342 aa		14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	MRPS14	O60783	128 aa	Known RBP	14.54	□□□□□ -0.08
DDX39A-209	ENST00000589318	KCNK5	O95279	499 aa		14.54	□□□□□ -0.08

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