RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 HNMTP50135 292 aa13.75□□□□□ -0.21
SF3A2-204ENST00000589118 HNRNPH2P55795 449 aaKnown RBP13.75□□□□□ -0.21
SF3A2-204ENST00000589118 SLC37A1P57057 533 aa13.75□□□□□ -0.21
SF3A2-204ENST00000589118 RNF111Q6ZNA4 994 aa13.75□□□□□ -0.21
SF3A2-204ENST00000589118 SLC29A4Q7RTT9 530 aa13.75□□□□□ -0.21
SF3A2-204ENST00000589118 LRRC75A-AS1Q8N1F1 130 aa13.75□□□□□ -0.21
SF3A2-204ENST00000589118 BBOF1Q8ND07 529 aa13.75□□□□□ -0.21
SF3A2-204ENST00000589118 MAPK1IP1LQ8NDC0 245 aa13.75□□□□□ -0.21
SF3A2-204ENST00000589118 SIMC1Q8NDZ2 872 aa13.75□□□□□ -0.21
SF3A2-204ENST00000589118 PPP1R14CQ8TAE6 165 aa13.75□□□□□ -0.21
SF3A2-204ENST00000589118 RDH11Q8TC12 318 aa13.75□□□□□ -0.21
SF3A2-204ENST00000589118 SPPL2AQ8TCT8 520 aa13.75□□□□□ -0.21
SF3A2-204ENST00000589118 ZNF473Q8WTR7 871 aaKnown RBP13.75□□□□□ -0.21
SF3A2-204ENST00000589118 SMPDL3BQ92485 455 aa13.75□□□□□ -0.21
SF3A2-204ENST00000589118 ISL2Q96A47 359 aa13.75□□□□□ -0.21
SF3A2-204ENST00000589118 FBXL20Q96IG2 436 aa13.75□□□□□ -0.21
SF3A2-204ENST00000589118 KRT12Q99456 494 aa13.75□□□□□ -0.21
SF3A2-204ENST00000589118 TBCDQ9BTW9 1192 aa13.75□□□□□ -0.21
SF3A2-204ENST00000589118 ANGPTL4Q9BY76 406 aa13.75□□□□□ -0.21
SF3A2-204ENST00000589118 RPF2Q9H7B2 306 aaKnown RBP13.75□□□□□ -0.21
SF3A2-204ENST00000589118 WWOXQ9NZC7 414 aa13.75□□□□□ -0.21
SF3A2-204ENST00000589118 CUBNO60494 3623 aa13.75□□□□□ -0.21
SF3A2-204ENST00000589118 IL18BPO95998 194 aa13.74□□□□□ -0.21
SF3A2-204ENST00000589118 CASP3P42574 277 aa13.74□□□□□ -0.21
SF3A2-204ENST00000589118 CHIT1Q13231 466 aa13.74□□□□□ -0.21
SF3A2-204ENST00000589118 TGFBIQ15582 683 aa13.74□□□□□ -0.21
SF3A2-204ENST00000589118 ACKR1Q16570 336 aa13.74□□□□□ -0.21
SF3A2-204ENST00000589118 AP5B1Q2VPB7 878 aa13.74□□□□□ -0.21
SF3A2-204ENST00000589118 CAPN12Q6ZSI9 719 aa13.74□□□□□ -0.21
SF3A2-204ENST00000589118 C22orf34Q6ZV56 151 aa13.74□□□□□ -0.21
SF3A2-204ENST00000589118 NKAPQ8N5F7 415 aaKnown RBP13.74□□□□□ -0.21
SF3A2-204ENST00000589118 FAM83FQ8NEG4 500 aaPredicted RBP13.74□□□□□ -0.21
SF3A2-204ENST00000589118 PTCD3Q96EY7 689 aaKnown RBP13.74□□□□□ -0.21
SF3A2-204ENST00000589118 CCL19Q99731 98 aa13.74□□□□□ -0.21
SF3A2-204ENST00000589118 G6PC3Q9BUM1 346 aa13.74□□□□□ -0.21
SF3A2-204ENST00000589118 CAB39LQ9H9S4 337 aa13.74□□□□□ -0.21
SF3A2-204ENST00000589118 CALHM2Q9HA72 323 aa13.74□□□□□ -0.21
SF3A2-204ENST00000589118 PYCARDQ9ULZ3 195 aa13.74□□□□□ -0.21
SF3A2-204ENST00000589118 C2orf92A0A1B0GVN3 265 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 ANKRD33BA6NCL7 494 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 A8MXE2 369 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 CCNT2O60583 730 aaKnown RBP13.73□□□□□ -0.21
SF3A2-204ENST00000589118 CNOT4O95628 575 aaKnown RBP13.73□□□□□ -0.21
SF3A2-204ENST00000589118 CT62P0C5K7 136 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 CYP4B1P13584 511 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 TCEA1P23193 301 aaKnown RBP13.73□□□□□ -0.21
SF3A2-204ENST00000589118 GSTM2P28161 218 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 PTPN6P29350 595 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 TGM3Q08188 693 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 DDX39BQ13838 428 aaKnown RBP13.73□□□□□ -0.21
SF3A2-204ENST00000589118 OR4D1Q15615 310 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 NHSL2Q5HYW2 709 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 OR4C11Q6IEV9 310 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 GALNT7Q86SF2 657 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 ZC3HC1Q86WB0 502 aaKnown RBP13.73□□□□□ -0.21
SF3A2-204ENST00000589118 GPSM1Q86YR5 675 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 ANKMY2Q8IV38 441 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 ZNF441Q8N8Z8 693 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 GRK7Q8WTQ7 553 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 RIT1Q92963 219 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 EXT2Q93063 718 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 PIGTQ969N2 578 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 ZC3HAV1LQ96H79 300 aaKnown RBP13.73□□□□□ -0.21
SF3A2-204ENST00000589118 PHACTR1Q9C0D0 580 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 GPRC5BQ9NZH0 403 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 TESMINQ9Y4I5 508 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 SPACA6W5XKT8 324 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 MXRA5Q9NR99 2828 aa13.73□□□□□ -0.21
SF3A2-204ENST00000589118 SONP18583 2426 aaKnown RBP13.73□□□□□ -0.21
SF3A2-204ENST00000589118 GOLGA6L10A0A0M3HER8 536 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 TP53I11O14683 189 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 CTIFO43310 598 aaKnown RBP13.72□□□□□ -0.21
SF3A2-204ENST00000589118 OR10H2O60403 315 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 RCBTB2O95199 551 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 TTC4O95801 387 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 PLIN5Q00G26 463 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 IRF8Q02556 426 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 KRTAP1-1Q07627 177 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 TBL3Q12788 808 aaKnown RBP13.72□□□□□ -0.21
SF3A2-204ENST00000589118 RCAN2Q14206 197 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 RPS6KA2Q15349 733 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 NNATQ16517 81 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 TIGD3Q6B0B8 471 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 ANGPTL8Q6UXH0 198 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 ZNF550Q7Z398 422 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 GPR180Q86V85 440 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 PACS2Q86VP3 889 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 PHC2Q8IXK0 858 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 ZPLD1Q8TCW7 415 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 WDR34Q96EX3 536 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 PIP5K1AQ99755 562 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 GALNT9Q9HCQ5 603 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 SERHLQ9NQF3 203 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 MAPRE3Q9UPY8 281 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 DTX4Q9Y2E6 619 aa13.72□□□□□ -0.21
SF3A2-204ENST00000589118 MTO1Q9Y2Z2 717 aaKnown RBP13.72□□□□□ -0.21
SF3A2-204ENST00000589118 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.71□□□□□ -0.21
SF3A2-204ENST00000589118 A0A1W2PR48 441 aa13.71□□□□□ -0.21
SF3A2-204ENST00000589118 SYNDIG1LA6NDD5 238 aa13.71□□□□□ -0.21
SF3A2-204ENST00000589118 RNF212BA8MTL3 300 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms