RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 PHF3Q92576 2039 aaKnown RBP5.89□□□□□ -1.47
SDF2-205ENST00000587629 PRRC2AP48634 2157 aaKnown RBP5.89□□□□□ -1.47
SDF2-205ENST00000587629 C2orf92A0A1B0GVN3 265 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 A6NNC1 897 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 FAM47E-STBD1D6RA91 191 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 CCDC188H7C350 402 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 DVL2O14641 736 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 TMPRSS11DO60235 418 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 KERAO60938 352 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 SCELO95171 688 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 C1QAP02745 245 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 CLPSP04118 112 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 LTA4HP09960 611 aaKnown RBP5.88□□□□□ -1.47
SDF2-205ENST00000587629 FBXO45P0C2W1 286 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 FAM58BPP0C7Q3 252 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 NR2F6P10588 404 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 GFAPP14136 432 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 DNASE1P24855 282 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 PTX3P26022 381 aaPredicted RBP5.88□□□□□ -1.47
SDF2-205ENST00000587629 BSGP35613 385 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 ARL1P40616 181 aaPredicted RBP5.88□□□□□ -1.47
SDF2-205ENST00000587629 BUD31P41223 144 aaPredicted RBP5.88□□□□□ -1.47
SDF2-205ENST00000587629 MASP1P48740 699 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 PLTPP55058 493 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 SLC37A1P57057 533 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 C2orf54Q08AI8 447 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 FOXD4Q12950 439 aaPredicted RBP5.88□□□□□ -1.47
SDF2-205ENST00000587629 EBPQ15125 230 aaKnown RBP5.88□□□□□ -1.47
SDF2-205ENST00000587629 TRADDQ15628 312 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 NNATQ16517 81 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 NTRK2Q16620 822 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 KBTBD12Q3ZCT8 623 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 ACSF3Q4G176 576 aaPredicted RBP5.88□□□□□ -1.47
SDF2-205ENST00000587629 GRTP1Q5TC63 336 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 HLA-DQA1Q5Y7H0 255 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 PLXDC2Q6UX71 529 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 Q71RC1 249 aaPredicted RBP5.88□□□□□ -1.47
SDF2-205ENST00000587629 CDC20BQ86Y33 519 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 ST13P4Q8IZP2 240 aaPredicted RBP5.88□□□□□ -1.47
SDF2-205ENST00000587629 TAGAPQ8N103 731 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 SLC15A4Q8N697 577 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 LINC01560Q8TB33 94 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 FBF1Q8TES7 1133 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 RNASE6Q93091 150 aaKnown RBP5.88□□□□□ -1.47
SDF2-205ENST00000587629 ART5Q96L15 291 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 ZNF597Q96LX8 424 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 RILPQ96NA2 401 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 CDK15Q96Q40 435 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 TRIB1Q96RU8 372 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 ATOH8Q96SQ7 321 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 TIMP4Q99727 224 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 FOXC2Q99958 501 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 CENPKQ9BS16 269 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 ERP44Q9BS26 406 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 ACKR4Q9NPB9 350 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 TEX10Q9NXF1 929 aaPredicted RBP5.88□□□□□ -1.47
SDF2-205ENST00000587629 MS4A12Q9NXJ0 267 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 GRHL1Q9NZI5 618 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 B4GALT7Q9UBV7 327 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 PHF11Q9UIL8 331 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 CBLCQ9ULV8 474 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 RNF11Q9Y3C5 154 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 ASB4Q9Y574 426 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 DNAJC13O75165 2243 aa5.88□□□□□ -1.47
SDF2-205ENST00000587629 NIPBLQ6KC79 2804 aaeCLIP5.88□□□□□ -1.47
SDF2-205ENST00000587629 NCKAP5O14513 1909 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 A0A0A6YYD5 115 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 TUBAL3A6NHL2 446 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 AHRRA9YTQ3 701 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 EEF1E1-BLOC1S5C9J1V9 151 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 TP53I11O14683 189 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 GNB5O14775 395 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 EEF1E1O43324 174 aaKnown RBP5.87□□□□□ -1.47
SDF2-205ENST00000587629 RAD51CO43502 376 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 TRIM3O75382 744 aaPredicted RBP5.87□□□□□ -1.47
SDF2-205ENST00000587629 SIX3O95343 332 aaPredicted RBP5.87□□□□□ -1.47
SDF2-205ENST00000587629 AIFM1O95831 613 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 EPPINO95925 133 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 IL2RAP01589 272 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 KLK1P06870 262 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 CT62P0C5K7 136 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 MTHFD2P13995 350 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 HOXB4P17483 251 aaPredicted RBP5.87□□□□□ -1.47
SDF2-205ENST00000587629 BMP7P18075 431 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 NT5EP21589 574 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 TACR1P25103 407 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 PIK3R1P27986 724 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 CRABP2P29373 138 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 SERPINB1P30740 379 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 CEACAM8P31997 349 aaPredicted RBP5.87□□□□□ -1.47
SDF2-205ENST00000587629 PIK3CBP42338 1070 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 MAGEA4P43358 317 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 ASCL1P50553 236 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 ZNF136P52737 540 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 ADAM8P78325 824 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 PHEXP78562 749 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 SRYQ05066 204 aa5.87□□□□□ -1.47
SDF2-205ENST00000587629 CRYZQ08257 329 aaKnown RBP5.87□□□□□ -1.47
SDF2-205ENST00000587629 TBL3Q12788 808 aaKnown RBP5.87□□□□□ -1.47
SDF2-205ENST00000587629 ILF2Q12905 390 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms