RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 RAB3IPQ96QF0 476 aaPredicted RBP13.99□□□□□ -0.17
NFIX-208ENST00000587260 BBS4Q96RK4 519 aa13.99□□□□□ -0.17
NFIX-208ENST00000587260 VN1R1Q9GZP7 353 aa13.99□□□□□ -0.17
NFIX-208ENST00000587260 SLC26A1Q9H2B4 701 aa13.99□□□□□ -0.17
NFIX-208ENST00000587260 CMTM6Q9NX76 183 aa13.99□□□□□ -0.17
NFIX-208ENST00000587260 CD300AQ9UGN4 299 aa13.99□□□□□ -0.17
NFIX-208ENST00000587260 VPS4AQ9UN37 437 aa13.99□□□□□ -0.17
NFIX-208ENST00000587260 MSRB2Q9Y3D2 182 aa13.99□□□□□ -0.17
NFIX-208ENST00000587260 MMACHCQ9Y4U1 282 aa13.99□□□□□ -0.17
NFIX-208ENST00000587260 CLDN16Q9Y5I7 305 aa13.99□□□□□ -0.17
NFIX-208ENST00000587260 TGFBR3LH3BV60 316 aa13.98□□□□□ -0.17
NFIX-208ENST00000587260 GSNP06396 782 aa13.98□□□□□ -0.17
NFIX-208ENST00000587260 IFI6P09912 130 aa13.98□□□□□ -0.17
NFIX-208ENST00000587260 CPMP14384 443 aa13.98□□□□□ -0.17
NFIX-208ENST00000587260 PORP16435 677 aaPredicted RBP13.98□□□□□ -0.17
NFIX-208ENST00000587260 DLSTP36957 453 aa13.98□□□□□ -0.17
NFIX-208ENST00000587260 SLC7A2P52569 658 aa13.98□□□□□ -0.17
NFIX-208ENST00000587260 RHAGQ02094 409 aa13.98□□□□□ -0.17
NFIX-208ENST00000587260 GTDC1Q4AE62 458 aa13.98□□□□□ -0.17
NFIX-208ENST00000587260 SAMD4BQ5PRF9 694 aaKnown RBP13.98□□□□□ -0.17
NFIX-208ENST00000587260 ZNF551Q7Z340 670 aaPredicted RBP13.98□□□□□ -0.17
NFIX-208ENST00000587260 SCUBE1Q8IWY4 988 aa13.98□□□□□ -0.17
NFIX-208ENST00000587260 CCDC116Q8IYX3 515 aa13.98□□□□□ -0.17
NFIX-208ENST00000587260 LRRC25Q8N386 305 aaPredicted RBP13.98□□□□□ -0.17
NFIX-208ENST00000587260 FBXW8Q8N3Y1 598 aa13.98□□□□□ -0.17
NFIX-208ENST00000587260 IL22RA1Q8N6P7 574 aa13.98□□□□□ -0.17
NFIX-208ENST00000587260 ZFP90Q8TF47 636 aa13.98□□□□□ -0.17
NFIX-208ENST00000587260 ZNF578Q96N58 590 aaPredicted RBP13.98□□□□□ -0.17
NFIX-208ENST00000587260 PTCHD1Q96NR3 888 aa13.98□□□□□ -0.17
NFIX-208ENST00000587260 CPPED1Q9BRF8 314 aaPredicted RBP13.98□□□□□ -0.17
NFIX-208ENST00000587260 CRB3Q9BUF7 120 aa13.98□□□□□ -0.17
NFIX-208ENST00000587260 WDR54Q9H977 334 aa13.98□□□□□ -0.17
NFIX-208ENST00000587260 NECTIN3Q9NQS3 549 aa13.98□□□□□ -0.17
NFIX-208ENST00000587260 SIRT3Q9NTG7 399 aaPredicted RBP13.98□□□□□ -0.17
NFIX-208ENST00000587260 PTRH2Q9Y3E5 179 aaKnown RBP13.98□□□□□ -0.17
NFIX-208ENST00000587260 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.98□□□□□ -0.17
NFIX-208ENST00000587260 ASPMQ8IZT6 3477 aa13.98□□□□□ -0.17
NFIX-208ENST00000587260 LOC101059948A0A1B0GTJ6 334 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 VSTM2BA6NLU5 285 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 IDSB3KWA1 339 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.97□□□□□ -0.17
NFIX-208ENST00000587260 NME4O00746 187 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 SLITRK5O94991 958 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 ATP1B1P05026 303 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 HEXBP07686 556 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 SLC35E2P0CK97 266 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 LIPCP11150 499 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 HSD17B1P14061 328 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 UQCRC2P22695 453 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 PPIBP23284 216 aaKnown RBP13.97□□□□□ -0.17
NFIX-208ENST00000587260 FEN1P39748 380 aaKnown RBP13.97□□□□□ -0.17
NFIX-208ENST00000587260 NCBP2P52298 156 aaKnown RBP eCLIP13.97□□□□□ -0.17
NFIX-208ENST00000587260 CORO7P57737 925 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 EEFSECP57772 596 aaKnown RBP13.97□□□□□ -0.17
NFIX-208ENST00000587260 DUSP2Q05923 314 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 STX4Q12846 297 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 DNASE1L3Q13609 305 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 CEACAM7Q14002 265 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 TBC1D25Q3MII6 688 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 RABL3Q5HYI8 236 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 DNAJC14Q6Y2X3 702 aaPredicted RBP13.97□□□□□ -0.17
NFIX-208ENST00000587260 TMEM64Q6YI46 380 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 QSOX2Q6ZRP7 698 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 GPR155Q7Z3F1 870 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 ULK2Q8IYT8 1036 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 NKD1Q969G9 470 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 CXorf36Q9H7Y0 433 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 TPT1P8Q9HAU6 139 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 ADA2Q9NZK5 511 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.97□□□□□ -0.17
NFIX-208ENST00000587260 C3orf18Q9UK00 162 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 NXT1Q9UKK6 140 aaKnown RBP13.97□□□□□ -0.17
NFIX-208ENST00000587260 ACSL6Q9UKU0 697 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 L3MBTL1Q9Y468 752 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 CACNA1AO00555 2505 aa13.97□□□□□ -0.17
NFIX-208ENST00000587260 CLIC1O00299 241 aa13.96□□□□□ -0.17
NFIX-208ENST00000587260 PLOD2O00469 737 aa13.96□□□□□ -0.17
NFIX-208ENST00000587260 DNAJA2O60884 412 aa13.96□□□□□ -0.17
NFIX-208ENST00000587260 ABCB1P08183 1280 aaPredicted RBP13.96□□□□□ -0.17
NFIX-208ENST00000587260 GPX2P18283 190 aa13.96□□□□□ -0.17
NFIX-208ENST00000587260 F8A1P23610 371 aa13.96□□□□□ -0.17
NFIX-208ENST00000587260 FOLR3P41439 243 aa13.96□□□□□ -0.17
NFIX-208ENST00000587260 GAB1Q13480 694 aa13.96□□□□□ -0.17
NFIX-208ENST00000587260 LANCL3Q6ZV70 420 aa13.96□□□□□ -0.17
NFIX-208ENST00000587260 DTX1Q86Y01 620 aa13.96□□□□□ -0.17
NFIX-208ENST00000587260 CLPTM1LQ96KA5 538 aa13.96□□□□□ -0.17
NFIX-208ENST00000587260 MESP1Q9BRJ9 268 aa13.96□□□□□ -0.17
NFIX-208ENST00000587260 IKZF5Q9H5V7 419 aa13.96□□□□□ -0.17
NFIX-208ENST00000587260 EPS8L2Q9H6S3 715 aa13.96□□□□□ -0.17
NFIX-208ENST00000587260 KAT8Q9H7Z6 458 aaKnown RBP13.96□□□□□ -0.17
NFIX-208ENST00000587260 SEMA3GQ9NS98 782 aa13.96□□□□□ -0.17
NFIX-208ENST00000587260 NTMQ9P121 344 aa13.96□□□□□ -0.17
NFIX-208ENST00000587260 CORO2BQ9UQ03 480 aa13.96□□□□□ -0.17
NFIX-208ENST00000587260 PADI2Q9Y2J8 665 aa13.96□□□□□ -0.17
NFIX-208ENST00000587260 MRPS18BQ9Y676 258 aaKnown RBP13.96□□□□□ -0.17
NFIX-208ENST00000587260 SYNDIG1LA6NDD5 238 aa13.95□□□□□ -0.18
NFIX-208ENST00000587260 PRORSD1PA6NEY8 169 aa13.95□□□□□ -0.18
NFIX-208ENST00000587260 EVPLLA8MZ36 301 aa13.95□□□□□ -0.18
NFIX-208ENST00000587260 KLF7O75840 302 aaPredicted RBP13.95□□□□□ -0.18
NFIX-208ENST00000587260 RECKO95980 971 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms