RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 AQP1P29972 269 aa19.22■□□□□ 0.67
ATG4D-204ENST00000586417 GPC1P35052 558 aa19.22■□□□□ 0.67
ATG4D-204ENST00000586417 CDK6Q00534 326 aa19.22■□□□□ 0.67
ATG4D-204ENST00000586417 FOLH1Q04609 750 aa19.22■□□□□ 0.67
ATG4D-204ENST00000586417 OR52E8Q6IFG1 317 aa19.22■□□□□ 0.67
ATG4D-204ENST00000586417 TMEM71Q6P5X7 295 aa19.22■□□□□ 0.67
ATG4D-204ENST00000586417 CEACAM20Q6UY09 585 aa19.22■□□□□ 0.67
ATG4D-204ENST00000586417 CCDC80Q76M96 950 aa19.22■□□□□ 0.67
ATG4D-204ENST00000586417 CBR4Q8N4T8 237 aa19.22■□□□□ 0.67
ATG4D-204ENST00000586417 PACRGLQ8N7B6 248 aa19.22■□□□□ 0.67
ATG4D-204ENST00000586417 C9orf16Q9BUW7 83 aa19.22■□□□□ 0.67
ATG4D-204ENST00000586417 CHRNA10Q9GZZ6 450 aa19.22■□□□□ 0.67
ATG4D-204ENST00000586417 TOR4AQ9NXH8 423 aa19.22■□□□□ 0.67
ATG4D-204ENST00000586417 PSME2Q9UL46 239 aa19.22■□□□□ 0.67
ATG4D-204ENST00000586417 COL27A1Q8IZC6 1860 aaPredicted RBP19.22■□□□□ 0.67
ATG4D-204ENST00000586417 SEPHS1P49903 392 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 LIMK1P53667 647 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 PCBP3P57721 371 aaKnown RBP19.21■□□□□ 0.67
ATG4D-204ENST00000586417 SPIDRQ14159 915 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 TRIP6Q15654 476 aaKnown RBP19.21■□□□□ 0.67
ATG4D-204ENST00000586417 TMTC4Q5T4D3 741 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 TNFAIP8L2Q6P589 184 aaPredicted RBP19.21■□□□□ 0.67
ATG4D-204ENST00000586417 VTCN1Q7Z7D3 282 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 OR5T3Q8NGG3 340 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 SFXN5Q8TD22 340 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 GFM1Q96RP9 751 aaKnown RBP19.21■□□□□ 0.67
ATG4D-204ENST00000586417 CD180Q99467 661 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 GIMAP4Q9NUV9 329 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 DNAJB9Q9UBS3 223 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 RAB26Q9ULW5 256 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 ZNF780BQ9Y6R6 833 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 SPTBP11277 2137 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 AGRPO00253 132 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 MED26O95402 600 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 MPIP34949 423 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 SIM1P81133 766 aaPredicted RBP19.21■□□□□ 0.67
ATG4D-204ENST00000586417 TP53BP2Q13625 1128 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 GPR19Q15760 415 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.21■□□□□ 0.67
ATG4D-204ENST00000586417 CYBRD1Q53TN4 286 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 CA13Q8N1Q1 262 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 VPS50Q96JG6 964 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 HSH2DQ96JZ2 352 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 A4GALTQ9NPC4 353 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 SEMA3GQ9NS98 782 aa19.21■□□□□ 0.67
ATG4D-204ENST00000586417 ZCCHC3Q9NUD5 404 aaKnown RBP19.21■□□□□ 0.67
ATG4D-204ENST00000586417 IGHV5-10-1A0A0J9YXX1 117 aa19.2■□□□□ 0.66
ATG4D-204ENST00000586417 HMGN4O00479 90 aa19.2■□□□□ 0.66
ATG4D-204ENST00000586417 CYR61O00622 381 aa19.2■□□□□ 0.66
ATG4D-204ENST00000586417 TXNDC9O14530 226 aa19.2■□□□□ 0.66
ATG4D-204ENST00000586417 RASAL1O95294 804 aa19.2■□□□□ 0.66
ATG4D-204ENST00000586417 CST1P01037 141 aa19.2■□□□□ 0.66
ATG4D-204ENST00000586417 TLX1P31314 330 aaPredicted RBP19.2■□□□□ 0.66
ATG4D-204ENST00000586417 HSPA13P48723 471 aa19.2■□□□□ 0.66
ATG4D-204ENST00000586417 MYBPC3Q14896 1274 aa19.2■□□□□ 0.66
ATG4D-204ENST00000586417 ZC3H7AQ8IWR0 971 aaKnown RBP19.2■□□□□ 0.66
ATG4D-204ENST00000586417 RCBTB1Q8NDN9 531 aa19.2■□□□□ 0.66
ATG4D-204ENST00000586417 TMEM52Q8NDY8 209 aa19.2■□□□□ 0.66
ATG4D-204ENST00000586417 OR9A2Q8NGT5 310 aa19.2■□□□□ 0.66
ATG4D-204ENST00000586417 TMBIM1Q969X1 311 aa19.2■□□□□ 0.66
ATG4D-204ENST00000586417 TBC1D20Q96BZ9 403 aa19.2■□□□□ 0.66
ATG4D-204ENST00000586417 NPLQ9BXD5 320 aaPredicted RBP19.2■□□□□ 0.66
ATG4D-204ENST00000586417 IL1RAPQ9NPH3 570 aa19.2■□□□□ 0.66
ATG4D-204ENST00000586417 AP4B1Q9Y6B7 739 aa19.2■□□□□ 0.66
ATG4D-204ENST00000586417 D6RAR5 112 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 SGK494L7N484 410 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 DLGAP1O14490 977 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 DENRO43583 198 aaKnown RBP19.19■□□□□ 0.66
ATG4D-204ENST00000586417 MLLT3P42568 568 aaPredicted RBP19.19■□□□□ 0.66
ATG4D-204ENST00000586417 CLDN6P56747 220 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 KCNAB1Q14722 419 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 MAPK11Q15759 364 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 CRB2Q5IJ48 1285 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 TMEM107Q6UX40 140 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 B3GNT8Q7Z7M8 397 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 ZDHHC21Q8IVQ6 265 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 OR4D9Q8NGE8 314 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 OR9A4Q8NGU2 314 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 TAMM41Q96BW9 452 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 SLC35G5Q96KT7 338 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 PDP2Q9P2J9 529 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 PLCL2Q9UPR0 1127 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 ADAMTS20P59510 1910 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 TM4SF5O14894 197 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 RDH16O75452 317 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 TFPTP0C1Z6 253 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 XKP51811 444 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 SHC2P98077 582 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 ELOAQ14241 798 aaKnown RBP19.19■□□□□ 0.66
ATG4D-204ENST00000586417 LTB4RQ15722 352 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 C6orf52Q5T4I8 152 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 TBPL2Q6SJ96 375 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 SLC30A8Q8IWU4 369 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 SAMD14Q8IZD0 417 aaPredicted RBP19.19■□□□□ 0.66
ATG4D-204ENST00000586417 CARFQ8N187 725 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 LRRC25Q8N386 305 aaPredicted RBP19.19■□□□□ 0.66
ATG4D-204ENST00000586417 OR4K14Q8NGD5 310 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 SLC38A5Q8WUX1 472 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 RAB8BQ92930 207 aa19.19■□□□□ 0.66
ATG4D-204ENST00000586417 MOAP1Q96BY2 351 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms