RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ELOAQ14241 798 aaKnown RBP11.88□□□□□ -0.51
VMP1-202ENST00000585847 C6orf15Q6UXA7 325 aaPredicted RBP11.88□□□□□ -0.51
VMP1-202ENST00000585847 RIPOR1Q6ZS17 1223 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 ZNF595Q8IYB9 648 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 METTL25Q8N6Q8 603 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 OR7A2PQ8NGA2 310 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 OR5T3Q8NGG3 340 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 OR9A4Q8NGU2 314 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 NKD1Q969G9 470 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 NCLNQ969V3 563 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 CLIP3Q96DZ5 547 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 LRGUKQ96M69 825 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 RNF145Q96MT1 663 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 KCTD14Q9BQ13 255 aaPredicted RBP11.88□□□□□ -0.51
VMP1-202ENST00000585847 CPPED1Q9BRF8 314 aaPredicted RBP11.88□□□□□ -0.51
VMP1-202ENST00000585847 THUMPD3Q9BV44 507 aaKnown RBP11.88□□□□□ -0.51
VMP1-202ENST00000585847 SORBS1Q9BX66 1292 aaKnown RBP11.88□□□□□ -0.51
VMP1-202ENST00000585847 CHST8Q9H2A9 424 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 DENND2DQ9H6A0 471 aaPredicted RBP11.88□□□□□ -0.51
VMP1-202ENST00000585847 KAT8Q9H7Z6 458 aaKnown RBP11.88□□□□□ -0.51
VMP1-202ENST00000585847 UTS2RQ9UKP6 389 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 MAU2Q9Y6X3 613 aa11.88□□□□□ -0.51
VMP1-202ENST00000585847 NUP210LQ5VU65 1888 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 PRORSD1PA6NEY8 169 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 C9JVG2 144 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 STMND1H3BQB6 276 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 SGK494L7N484 410 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 NME4O00746 187 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 ATXN7O15265 892 aaPredicted RBP11.87□□□□□ -0.51
VMP1-202ENST00000585847 AIFM1O95831 613 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 PRB1P04280 392 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 GPIP06744 558 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 UMPSP11172 480 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 RNH1P13489 461 aaKnown RBP11.87□□□□□ -0.51
VMP1-202ENST00000585847 GPX2P18283 190 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 CSNK2A2P19784 350 aaPredicted RBP11.87□□□□□ -0.51
VMP1-202ENST00000585847 ALAS2P22557 587 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 CPN2P22792 545 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 CERS1P27544 350 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 EIF2S3P41091 472 aaKnown RBP11.87□□□□□ -0.51
VMP1-202ENST00000585847 RAB38P57729 211 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 PRR5P85299 388 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 MAT1AQ00266 395 aaKnown RBP11.87□□□□□ -0.51
VMP1-202ENST00000585847 LIPEQ05469 1076 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 CLN3Q13286 438 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 RUNX2Q13950 521 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 VEZF1Q14119 521 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 GNA13Q14344 377 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 SYT16Q17RD7 645 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 NKAIN1Q4KMZ8 207 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 DEFB134Q4QY38 66 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 DHFR2Q86XF0 187 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 HPS6Q86YV9 775 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 NLGN4XQ8N0W4 816 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 EID3Q8N140 333 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 EFCAB3Q8N7B9 438 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 ENDOVQ8N8Q3 282 aaKnown RBP11.87□□□□□ -0.51
VMP1-202ENST00000585847 NLGN4YQ8NFZ3 816 aaPredicted RBP11.87□□□□□ -0.51
VMP1-202ENST00000585847 OR2T12Q8NG77 320 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 OR56A1Q8NGH5 318 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 OR4A15Q8NGL6 344 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 SNIP1Q8TAD8 396 aaKnown RBP11.87□□□□□ -0.51
VMP1-202ENST00000585847 CT55Q8WUE5 264 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 COL26A1Q96A83 441 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 CCDC124Q96CT7 223 aaKnown RBP11.87□□□□□ -0.51
VMP1-202ENST00000585847 FAM120BQ96EK7 910 aaKnown RBP11.87□□□□□ -0.51
VMP1-202ENST00000585847 DUS3LQ96G46 650 aaKnown RBP11.87□□□□□ -0.51
VMP1-202ENST00000585847 OR1F2PQ96R84 312 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 CMTM6Q9NX76 183 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 VAPAQ9P0L0 249 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 EXO1Q9UQ84 846 aaKnown RBP11.87□□□□□ -0.51
VMP1-202ENST00000585847 SSUH2Q9Y2M2 353 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 NAALAD2Q9Y3Q0 740 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 KALRNO60229 2985 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 PCSK5Q92824 1860 aa11.87□□□□□ -0.51
VMP1-202ENST00000585847 IGLV3-12A0A075B6K2 115 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 ZNF860A6NHJ4 632 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 MYO1GB0I1T2 1018 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 CLIC1O00299 241 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 CLDN4O14493 209 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 ACOT8O14734 319 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 RDH16O75452 317 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 AGR2O95994 175 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 C8BP07358 591 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 LIPCP11150 499 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 BMP2P12643 396 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 WT1P19544 449 aaPredicted RBP11.86□□□□□ -0.51
VMP1-202ENST00000585847 STAT5AP42229 794 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 ALDH9A1P49189 494 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 GSK3BP49841 420 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 MANFP55145 182 aaKnown RBP11.86□□□□□ -0.51
VMP1-202ENST00000585847 LIM2P55344 173 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 PHC1P78364 1004 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 OLR1P78380 273 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 DCDP81605 110 aaKnown RBP11.86□□□□□ -0.51
VMP1-202ENST00000585847 SNCBQ16143 134 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 INTS11Q5TA45 600 aaKnown RBP11.86□□□□□ -0.51
VMP1-202ENST00000585847 MRPL14Q6P1L8 145 aaKnown RBP11.86□□□□□ -0.51
VMP1-202ENST00000585847 FKBP9P1Q75LS8 142 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 CALHM3Q86XJ0 350 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms