RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 CYP20A1Q6UW02 462 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 PM20D2Q8IYS1 436 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 LIX1Q8N485 282 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 L3MBTL4Q8NA19 623 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 OR10G3Q8NGC4 313 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 NXNL1Q96CM4 212 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 MTERF1Q99551 399 aaKnown RBP13.79□□□□□ -0.2
VAPA-209ENST00000585042 DOHHQ9BU89 302 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 TMUB1Q9BVT8 246 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 SORBS1Q9BX66 1292 aaKnown RBP13.79□□□□□ -0.2
VAPA-209ENST00000585042 ERVK-6Q9BXR3 956 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 ZNF717Q9BY31 904 aaPredicted RBP13.79□□□□□ -0.2
VAPA-209ENST00000585042 ACTR8Q9H981 624 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 SNX15Q9NRS6 342 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 ERVK-19Q9WJR5 959 aa13.79□□□□□ -0.2
VAPA-209ENST00000585042 ARHGAP21Q5T5U3 1957 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 C2orf92A0A1B0GVN3 265 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 A0A1W2PR48 441 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 DVL2O14641 736 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 FAM155BO75949 473 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 CTAGE8P0CG41 777 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 NR2F6P10588 404 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 CD99P14209 185 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 MAGEA4P43358 317 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 TMED10P49755 219 aaKnown RBP13.78□□□□□ -0.2
VAPA-209ENST00000585042 RPS13P62277 151 aaKnown RBP13.78□□□□□ -0.2
VAPA-209ENST00000585042 RPP38P78345 283 aaKnown RBP13.78□□□□□ -0.2
VAPA-209ENST00000585042 MRPS25P82663 173 aaKnown RBP13.78□□□□□ -0.2
VAPA-209ENST00000585042 DDX39BQ13838 428 aaKnown RBP13.78□□□□□ -0.2
VAPA-209ENST00000585042 SLMAPQ14BN4 828 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 PRAMEF20Q5VT98 475 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 WDR53Q7Z5U6 358 aaPredicted RBP13.78□□□□□ -0.2
VAPA-209ENST00000585042 CMC1Q7Z7K0 106 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 LACC1Q8IV20 430 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 CTAGE4Q8IX94 777 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 ZNF441Q8N8Z8 693 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 C17orf47Q8NEP4 570 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 FBF1Q8TES7 1133 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 FAM222BQ8WU58 562 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 ZNF597Q96LX8 424 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 ANGPTL4Q9BY76 406 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 POLDIP3Q9BY77 421 aaKnown RBP13.78□□□□□ -0.2
VAPA-209ENST00000585042 RASSF1Q9NS23 344 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 NPFFR2Q9Y5X5 522 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 ZFHX3Q15911 3703 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 NINQ8N4C6 2090 aa13.78□□□□□ -0.2
VAPA-209ENST00000585042 SEMA3DO95025 777 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 HPNP05981 417 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 C2P06681 752 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 GFAPP14136 432 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 ASCL1P50553 236 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 PLTPP55058 493 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 NRG3P56975 720 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 GUCY2DQ02846 1103 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 FUT7Q11130 342 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 DUSP8Q13202 625 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 DAZAP2Q15038 168 aaPredicted RBP13.77□□□□□ -0.21
VAPA-209ENST00000585042 RPS6KA2Q15349 733 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 PFKFB4Q16877 469 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 NHSL2Q5HYW2 709 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 HLA-DQA1Q5Y7H0 255 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 KLC3Q6P597 504 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 SEM1Q6ZVN7 128 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 PACS2Q86VP3 889 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 NUDT13Q86X67 352 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 MYLK4Q86YV6 388 aaPredicted RBP13.77□□□□□ -0.21
VAPA-209ENST00000585042 CENPLQ8N0S6 344 aaPredicted RBP13.77□□□□□ -0.21
VAPA-209ENST00000585042 RNF175Q8N4F7 328 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 OR7G1Q8NGA0 311 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 WDR20Q8TBZ3 569 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 DIO2Q92813 273 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 RNASE6Q93091 150 aaKnown RBP13.77□□□□□ -0.21
VAPA-209ENST00000585042 GAL3ST4Q96RP7 486 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 SERPINI1Q99574 410 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 TIMP4Q99727 224 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 IPPKQ9H8X2 491 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 CXorf21Q9HAI6 301 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 MTRF1LQ9UGC7 380 aaKnown RBP13.77□□□□□ -0.21
VAPA-209ENST00000585042 FETUBQ9UGM5 382 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 ST6GALNAC2Q9UJ37 374 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 ADAM29Q9UKF5 820 aa13.77□□□□□ -0.21
VAPA-209ENST00000585042 TMPRSS11DO60235 418 aa13.76□□□□□ -0.21
VAPA-209ENST00000585042 EEDO75530 441 aaKnown RBP13.76□□□□□ -0.21
VAPA-209ENST00000585042 KLHL2O95198 593 aa13.76□□□□□ -0.21
VAPA-209ENST00000585042 GOSR1O95249 250 aa13.76□□□□□ -0.21
VAPA-209ENST00000585042 CLDN9O95484 217 aa13.76□□□□□ -0.21
VAPA-209ENST00000585042 IL2RAP01589 272 aa13.76□□□□□ -0.21
VAPA-209ENST00000585042 CLPSP04118 112 aa13.76□□□□□ -0.21
VAPA-209ENST00000585042 NAGAP17050 411 aa13.76□□□□□ -0.21
VAPA-209ENST00000585042 GDF1P27539 372 aa13.76□□□□□ -0.21
VAPA-209ENST00000585042 PIK3R1P27986 724 aa13.76□□□□□ -0.21
VAPA-209ENST00000585042 CRYZQ08257 329 aaKnown RBP13.76□□□□□ -0.21
VAPA-209ENST00000585042 GTF2H2Q13888 395 aa13.76□□□□□ -0.21
VAPA-209ENST00000585042 CPSF6Q16630 551 aaKnown RBP eCLIP13.76□□□□□ -0.21
VAPA-209ENST00000585042 ACSF3Q4G176 576 aaPredicted RBP13.76□□□□□ -0.21
VAPA-209ENST00000585042 GLE1Q53GS7 698 aaKnown RBP13.76□□□□□ -0.21
VAPA-209ENST00000585042 VASNQ6EMK4 673 aa13.76□□□□□ -0.21
VAPA-209ENST00000585042 OR52E8Q6IFG1 317 aa13.76□□□□□ -0.21
VAPA-209ENST00000585042 GTF2H2CQ6P1K8 395 aa13.76□□□□□ -0.21
VAPA-209ENST00000585042 TMEM81Q6P7N7 255 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms