RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 ZFP62Q8NB50 900 aaPredicted RBP12.31□□□□□ -0.44
SREBF1-223ENST00000584760 POGLUT1Q8NBL1 392 aa12.31□□□□□ -0.44
SREBF1-223ENST00000584760 OR4K14Q8NGD5 310 aa12.31□□□□□ -0.44
SREBF1-223ENST00000584760 ITLN2Q8WWU7 325 aaPredicted RBP12.31□□□□□ -0.44
SREBF1-223ENST00000584760 TM4SF18Q96CE8 201 aa12.31□□□□□ -0.44
SREBF1-223ENST00000584760 C11orf24Q96F05 449 aaPredicted RBP12.31□□□□□ -0.44
SREBF1-223ENST00000584760 APIPQ96GX9 242 aa12.31□□□□□ -0.44
SREBF1-223ENST00000584760 CXorf21Q9HAI6 301 aa12.31□□□□□ -0.44
SREBF1-223ENST00000584760 TNFRSF12AQ9NP84 129 aa12.31□□□□□ -0.44
SREBF1-223ENST00000584760 TIMMDC1Q9NPL8 285 aa12.31□□□□□ -0.44
SREBF1-223ENST00000584760 DEPPQ9NTK1 212 aa12.31□□□□□ -0.44
SREBF1-223ENST00000584760 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.31□□□□□ -0.44
SREBF1-223ENST00000584760 MCM8Q9UJA3 840 aa12.31□□□□□ -0.44
SREBF1-223ENST00000584760 ERVK-11Q9UQG0 969 aa12.31□□□□□ -0.44
SREBF1-223ENST00000584760 KLF2Q9Y5W3 355 aaPredicted RBP12.31□□□□□ -0.44
SREBF1-223ENST00000584760 F8P00451 2351 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 ZNF407Q9C0G0 2248 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 TRGV8A0A0C4DH27 118 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 A0A0G2JMM0 328 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 A0A1W2PPB8 328 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 A0A1W2PRS3 328 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 SERTM1A2A2V5 107 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 KIR3DP1A8MWS1 328 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 NPIPA5E9PKD4 350 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 H3BQF6 201 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 KLRC4-KLRK1H3BQV0 150 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 PEX1O43933 1283 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 PCDH7O60245 1069 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 CT62P0C5K7 136 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 CPMP14384 443 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 COX6B1P14854 86 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 HTR1EP28566 365 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 SSTR4P31391 388 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 PTGER4P35408 488 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 GPR85P60893 370 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 TRA2BP62995 288 aaKnown RBP12.3□□□□□ -0.44
SREBF1-223ENST00000584760 ASPHQ12797 758 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 ERCC6LQ2NKX8 1250 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 ZNF750Q32MQ0 723 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 SPIN4Q56A73 249 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 LYPD8Q6UX82 237 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 IL20RBQ6UXL0 311 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 RTL4Q6ZR62 310 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 MRGPRGQ86SM5 289 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 CHERPQ8IWX8 916 aaKnown RBP12.3□□□□□ -0.44
SREBF1-223ENST00000584760 GALNT12Q8IXK2 581 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 MREGQ8N565 214 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 BANPQ8N9N5 519 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 CCDC63Q8NA47 563 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 GOLM1Q8NBJ4 401 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 WWTR1Q9GZV5 400 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 SUCOQ9UBS9 1254 aaKnown RBP12.3□□□□□ -0.44
SREBF1-223ENST00000584760 MID2Q9UJV3 735 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 NPIPA1Q9UND3 350 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 PLLPQ9Y342 182 aa12.3□□□□□ -0.44
SREBF1-223ENST00000584760 DNAJC13O75165 2243 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 CCDC151A5D8V7 595 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 PINLYPA6NC86 204 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 OR6C76A6NM76 312 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 CCL21O00585 134 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 ASNA1O43681 348 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 SLC19A2O60779 497 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 ATP1B1P05026 303 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 TIA1P31483 386 aaKnown RBP eCLIP12.29□□□□□ -0.44
SREBF1-223ENST00000584760 RFC3P40938 356 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 CA7P43166 264 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 XKP51811 444 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 DUSP2Q05923 314 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 RBPJQ06330 500 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 ACSM2AQ08AH3 577 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 IFFO1Q0D2I5 559 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 FUT7Q11130 342 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.29□□□□□ -0.44
SREBF1-223ENST00000584760 ZNF791Q3KP31 576 aaPredicted RBP12.29□□□□□ -0.44
SREBF1-223ENST00000584760 KRTCAP3Q53RY4 240 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 PIGGQ5H8A4 983 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 CFAP157Q5JU67 520 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 ACSM2BQ68CK6 577 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 GALNT18Q6P9A2 607 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 OPN5Q6U736 354 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 SCIMPQ6UWF3 145 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 SLC29A4Q7RTT9 530 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 C10orf107Q8IVU9 208 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 ZNF615Q8N8J6 731 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 ZNF441Q8N8Z8 693 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 C16orf52Q8NHV5 167 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 SLC22A8Q8TCC7 542 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 CNRIP1Q96F85 164 aaPredicted RBP12.29□□□□□ -0.44
SREBF1-223ENST00000584760 CCDC120Q96HB5 630 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 SGCZQ96LD1 299 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 ZNF681Q96N22 645 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 GAL3ST4Q96RP7 486 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 FAIM2Q9BWQ8 316 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 ROPN1BQ9BZX4 212 aaPredicted RBP12.29□□□□□ -0.44
SREBF1-223ENST00000584760 ROPN1Q9HAT0 212 aaPredicted RBP12.29□□□□□ -0.44
SREBF1-223ENST00000584760 SH2D2AQ9NP31 389 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 CHST11Q9NPF2 352 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 SIRT5Q9NXA8 310 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 HEY2Q9UBP5 337 aa12.29□□□□□ -0.44
SREBF1-223ENST00000584760 SH3BGRL2Q9UJC5 107 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms