RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 SSX5O60225 188 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 ADH5P11766 374 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 DRD2P14416 443 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 AMY2BP19961 511 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 UQCRC1P31930 480 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 ETV4P43268 484 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 CDKN2DP55273 166 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 SCAPQ12770 1279 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 GK2Q14410 553 aaPredicted RBP12.48□□□□□ -0.41
RNF43-208ENST00000584437 DHCR24Q15392 516 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 TMEM234Q8WY98 164 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 FKBP10Q96AY3 582 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 DEFB118Q96PH6 123 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 MRI1Q9BV20 369 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 RXFP3Q9NSD7 469 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 KLRF1Q9NZS2 232 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 G3V2L1 256 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 TNFP01375 233 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 AK4P27144 223 aaPredicted RBP12.48□□□□□ -0.41
RNF43-208ENST00000584437 NAA10P41227 235 aaPredicted RBP12.48□□□□□ -0.41
RNF43-208ENST00000584437 PITPNBP48739 271 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 RING1Q06587 406 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 SFRP4Q6FHJ7 346 aaPredicted RBP12.48□□□□□ -0.41
RNF43-208ENST00000584437 SLC5A8Q8N695 610 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 ZSCAN4Q8NAM6 433 aaPredicted RBP12.48□□□□□ -0.41
RNF43-208ENST00000584437 C16orf58Q96GQ5 468 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 ANKRD26Q9UPS8 1709 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 HAPLN1P10915 354 aaPredicted RBP12.48□□□□□ -0.41
RNF43-208ENST00000584437 PIM1P11309 404 aaPredicted RBP12.48□□□□□ -0.41
RNF43-208ENST00000584437 PRKACAP17612 351 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 PFKLP17858 780 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 CNR2P34972 360 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 WNT4P56705 351 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 ZNF616Q08AN1 781 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 SPRED3Q2MJR0 410 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 KRBOX4Q5JUW0 171 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 UNC5DQ6UXZ4 953 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 CEP68Q76N32 757 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 CCDC116Q8IYX3 515 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 ZNF283Q8N7M2 679 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 OR52P1PQ8NH57 321 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 SETD7Q8WTS6 366 aaKnown RBP12.48□□□□□ -0.41
RNF43-208ENST00000584437 DPH2Q9BQC3 489 aaPredicted RBP12.48□□□□□ -0.41
RNF43-208ENST00000584437 GON7Q9BXV9 100 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 NELFAQ9H3P2 528 aa12.48□□□□□ -0.41
RNF43-208ENST00000584437 C1orf226A1L170 272 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 F8W036 122 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 FGF4P08620 206 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 SHMT2P34897 504 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 SH3BP2P78314 561 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 BLOC1S1P78537 153 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 OR51A7Q8NH64 312 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 C7orf50Q9BRJ6 194 aaKnown RBP12.47□□□□□ -0.41
RNF43-208ENST00000584437 IFNA17P01571 189 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 ELNP15502 786 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 KCNC1P48547 511 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 SLC10A2Q12908 348 aaPredicted RBP12.47□□□□□ -0.41
RNF43-208ENST00000584437 SPARTQ8N0X7 666 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 NINJ1Q92982 152 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 RELTQ969Z4 430 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 CNTNAP3BQ96NU0 1288 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 SLC29A1Q99808 456 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 BIN3Q9NQY0 253 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 Q9Y3F1 56 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 CACNA1FO60840 1977 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 KHNYNO15037 678 aaKnown RBP12.47□□□□□ -0.41
RNF43-208ENST00000584437 MITFO75030 526 aaPredicted RBP12.47□□□□□ -0.41
RNF43-208ENST00000584437 LCKP06239 509 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 CAMLGP49069 296 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 ZNF41P51814 821 aaPredicted RBP12.47□□□□□ -0.41
RNF43-208ENST00000584437 RAB11BQ15907 218 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 SLC35G1Q2M3R5 365 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 PXKQ7Z7A4 578 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 C14orf80Q86SX3 495 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 OR4E2Q8NGC2 313 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 SGTBQ96EQ0 304 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 PCTPQ9UKL6 214 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 A0A1W2PPK0 400 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 SULT1C2O00338 296 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 CXCR4P61073 352 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 MICAQ29983 383 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 AGAP6Q5VW22 663 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 ELMOD3Q96FG2 381 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 BORCS8Q96FH0 119 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 AGAP4Q96P64 663 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 ZNF701Q9NV72 531 aaPredicted RBP12.47□□□□□ -0.41
RNF43-208ENST00000584437 PARPBPQ9NWS1 579 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 TEX10Q9NXF1 929 aaPredicted RBP12.47□□□□□ -0.41
RNF43-208ENST00000584437 AP1M2Q9Y6Q5 423 aa12.47□□□□□ -0.41
RNF43-208ENST00000584437 B4GALT2O60909 372 aa12.46□□□□□ -0.41
RNF43-208ENST00000584437 PLGP00747 810 aaPredicted RBP12.46□□□□□ -0.41
RNF43-208ENST00000584437 TFP02787 698 aa12.46□□□□□ -0.41
RNF43-208ENST00000584437 ZNF16P17020 682 aaPredicted RBP12.46□□□□□ -0.41
RNF43-208ENST00000584437 CDK2P24941 298 aa12.46□□□□□ -0.41
RNF43-208ENST00000584437 CASRP41180 1078 aa12.46□□□□□ -0.41
RNF43-208ENST00000584437 RPL35P42766 123 aaKnown RBP12.46□□□□□ -0.41
RNF43-208ENST00000584437 NR4A2P43354 598 aa12.46□□□□□ -0.41
RNF43-208ENST00000584437 OR4D1Q15615 310 aa12.46□□□□□ -0.41
RNF43-208ENST00000584437 WDTC1Q8N5D0 677 aa12.46□□□□□ -0.41
RNF43-208ENST00000584437 TRAM1L1Q8N609 369 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms