RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 MYO1GB0I1T2 1018 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 NVLO15381 856 aaKnown RBP11.24□□□□□ -0.61
GGA3-217ENST00000583667 P2RX6O15547 441 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 B4GAT1O43505 415 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 ZBTB11O95625 1053 aaPredicted RBP11.24□□□□□ -0.61
GGA3-217ENST00000583667 CPSF4O95639 269 aaKnown RBP11.24□□□□□ -0.61
GGA3-217ENST00000583667 KRT75O95678 551 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 GSNP06396 782 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 PVRP15151 417 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 ATP6V1B2P21281 511 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 UQCRC2P22695 453 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 GNLYP22749 145 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 MVDP53602 400 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 MLLT10P55197 1068 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 RAB8AP61006 207 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 BTN3A2P78410 334 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 PLIN5Q00G26 463 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 RBBP4Q09028 425 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 FADDQ13158 208 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 MUM1Q2TAK8 710 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 GLYATQ6IB77 296 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 RNF111Q6ZNA4 994 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 MED25Q71SY5 747 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 SPATA24Q86W54 205 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 PLXDC1Q8IUK5 500 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 MICU2Q8IYU8 434 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 PQLC1Q8N2U9 271 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 DTWD1Q8N5C7 304 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 CSNK1A1LQ8N752 337 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 OR52N2Q8NGI0 321 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 OR10A6Q8NH74 314 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 PYDC1Q8WXC3 89 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 FAM120BQ96EK7 910 aaKnown RBP11.24□□□□□ -0.61
GGA3-217ENST00000583667 FCRL4Q96PJ5 515 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 MAP3K3Q99759 626 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 MACROD1Q9BQ69 325 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 EFHD1Q9BUP0 239 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 CHST8Q9H2A9 424 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 COPS7BQ9H9Q2 264 aaPredicted RBP11.24□□□□□ -0.61
GGA3-217ENST00000583667 SLC35C2Q9NQQ7 365 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 PDP2Q9P2J9 529 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 GMPR2Q9P2T1 348 aaKnown RBP11.24□□□□□ -0.61
GGA3-217ENST00000583667 PLCL2Q9UPR0 1127 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 AP4S1Q9Y587 144 aa11.24□□□□□ -0.61
GGA3-217ENST00000583667 MN1Q10571 1320 aaPredicted RBP11.24□□□□□ -0.61
GGA3-217ENST00000583667 HIVEP1P15822 2718 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 EME2A4GXA9 379 aaPredicted RBP11.23□□□□□ -0.61
GGA3-217ENST00000583667 H0Y3Z8 333 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 PDPK1O15530 556 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 B3GALT2O43825 422 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 PEX1O43933 1283 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 GALR3O60755 368 aaPredicted RBP11.23□□□□□ -0.61
GGA3-217ENST00000583667 GMNNO75496 209 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 CLDN1O95832 211 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 C6orf47O95873 294 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 B3GALT4O96024 378 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 ZNF888P0CJ79 500 aaPredicted RBP11.23□□□□□ -0.61
GGA3-217ENST00000583667 CD1CP29017 333 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 PPP1CAP62136 330 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 TXNL4AP83876 142 aaKnown RBP11.23□□□□□ -0.61
GGA3-217ENST00000583667 FAM53BQ14153 422 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 RGNQ15493 299 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 TCTE1Q5JU00 501 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 PERM1Q5SV97 790 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 TMEM64Q6YI46 380 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 RAB11FIP2Q7L804 512 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 ZNF551Q7Z340 670 aaPredicted RBP11.23□□□□□ -0.61
GGA3-217ENST00000583667 PRSS42Q7Z5A4 293 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 IFNEQ86WN2 208 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 DTX1Q86Y01 620 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 EID3Q8N140 333 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 OR4A15Q8NGL6 344 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 C9orf43Q8TAL5 461 aaPredicted RBP11.23□□□□□ -0.61
GGA3-217ENST00000583667 KLHL6Q8WZ60 621 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 SLCO4A1Q96BD0 722 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 C10orf90Q96M02 699 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 NSMCE2Q96MF7 247 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 ZNF681Q96N22 645 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 DPYSL5Q9BPU6 564 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 TRIM8Q9BZR9 551 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 TMEM38AQ9H6F2 299 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 RPF2Q9H7B2 306 aaKnown RBP11.23□□□□□ -0.61
GGA3-217ENST00000583667 PDE7BQ9NP56 450 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 EGFL7Q9UHF1 273 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 DAPP1Q9UN19 280 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 LRRC42Q9Y546 428 aa11.23□□□□□ -0.61
GGA3-217ENST00000583667 DHRS12A0PJE2 317 aa11.22□□□□□ -0.61
GGA3-217ENST00000583667 HNRNPRO43390 633 aaKnown RBP11.22□□□□□ -0.61
GGA3-217ENST00000583667 DUX1O43812 170 aa11.22□□□□□ -0.61
GGA3-217ENST00000583667 PRAMEF10O60809 474 aa11.22□□□□□ -0.61
GGA3-217ENST00000583667 TNFRSF21O75509 655 aa11.22□□□□□ -0.61
GGA3-217ENST00000583667 AIFM1O95831 613 aa11.22□□□□□ -0.61
GGA3-217ENST00000583667 IL10P22301 178 aa11.22□□□□□ -0.61
GGA3-217ENST00000583667 CERS1P27544 350 aa11.22□□□□□ -0.61
GGA3-217ENST00000583667 TLX1P31314 330 aaPredicted RBP11.22□□□□□ -0.61
GGA3-217ENST00000583667 VHLP40337 213 aa11.22□□□□□ -0.61
GGA3-217ENST00000583667 BUD31P41223 144 aaPredicted RBP11.22□□□□□ -0.61
GGA3-217ENST00000583667 PTDSS1P48651 473 aaKnown RBP11.22□□□□□ -0.61
GGA3-217ENST00000583667 MANFP55145 182 aaKnown RBP11.22□□□□□ -0.61
GGA3-217ENST00000583667 LIM2P55344 173 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms