RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	CPM	P14384	443 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	TSPAN8	P19075	237 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	PTGS2	P35354	604 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	DEK	P35659	375 aa	Known RBP	11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	TMED10	P49755	219 aa	Known RBP	11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	PSPH	P78330	225 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ASPH	Q12797	758 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	MAP4K2	Q12851	820 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	C3AR1	Q16581	482 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CMPK2	Q5EBM0	449 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	DGAT2L6	Q6ZPD8	337 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	RPS27L	Q71UM5	84 aa	Known RBP	11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	LRRN4CL	Q8ND94	238 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	FAM57A	Q8TBR7	257 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ITLN2	Q8WWU7	325 aa	Predicted RBP	11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	TM4SF18	Q96CE8	201 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	GSTO2	Q9H4Y5	243 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	RUBCNL	Q9H714	662 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	LIN28A	Q9H9Z2	209 aa	Known RBP	11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CHST11	Q9NPF2	352 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	DEPP	Q9NTK1	212 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	WBP11	Q9Y2W2	641 aa	Known RBP	11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	MEMO1	Q9Y316	297 aa		11.63	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708		A0A1W2PPM1	405 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	WASHC1	A8K0Z3	465 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708		G3V2L1	256 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	HRK	O00198	91 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	COPE	O14579	308 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	TP53I11	O14683	189 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	HS6ST1	O60243	411 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	PLIN3	O60664	434 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	WISP2	O76076	250 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	NADK	O95544	446 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	SHBG	P04278	402 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	NUDT17	P0C025	328 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	NAGA	P17050	411 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	NRG3	P56975	720 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	GPR85	P60893	370 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	PPIA	P62937	165 aa	Known RBP	11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	RPP38	P78345	283 aa	Known RBP	11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	PLGLB1	Q02325	96 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	SLC18A2	Q05940	514 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ACSM2A	Q08AH3	577 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	HEPACAM	Q14CZ8	416 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	NTRK2	Q16620	822 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CFAP157	Q5JU67	520 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	HLA-DQA1	Q5Y7H0	255 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ACSM2B	Q68CK6	577 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	LYPD8	Q6UX82	237 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	FRMD7	Q6ZUT3	714 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	FAM47E	Q6ZV65	393 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	MRGPRG	Q86SM5	289 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	DOLPP1	Q86YN1	238 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	GSPT2	Q8IYD1	628 aa	Known RBP	11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	VWA5B2	Q8N398	1253 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	FBXW8	Q8N3Y1	598 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	FAM109A	Q8N4B1	249 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	C1orf52	Q8N6N3	182 aa	Known RBP	11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ZNF615	Q8N8J6	731 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ZNF441	Q8N8Z8	693 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	FAM76A	Q8TAV0	307 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	AGAP11	Q8TF27	550 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	C11orf24	Q96F05	449 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	TRMO	Q9BU70	441 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ACPT	Q9BZG2	426 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ANKZF1	Q9H8Y5	726 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	MKS1	Q9NXB0	559 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	QPCTL	Q9NXS2	382 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	EHD3	Q9NZN3	535 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	TINAG	Q9UJW2	476 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	EMCN	Q9ULC0	261 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	BOK	Q9UMX3	212 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ZNF780B	Q9Y6R6	833 aa		11.62	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CROCC	Q5TZA2	2017 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708		A0A1B0GVC2	190 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CYSRT1	A8MQ03	144 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	BCKDK	O14874	412 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	SUSD5	O60279	629 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ZNF354A	O60765	605 aa	Predicted RBP	11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	BCAS2	O75934	225 aa	Predicted RBP	11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	IGHG3	P01860	377 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CLPS	P04118	112 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CPA3	P15088	417 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	KRT4	P19013	534 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	PTGER1	P34995	402 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	DCT	P40126	519 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	NAGLU	P54802	743 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	DCAF7	P61962	342 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	FOXO1	Q12778	655 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	PRICKLE4	Q2TBC4	344 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	ZNF750	Q32MQ0	723 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	TMEM211	Q6ICI0	200 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	EMB	Q6PCB8	327 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	RNF165	Q6ZSG1	346 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	TRIM46	Q7Z4K8	759 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CCNYL1	Q8N7R7	359 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	CTHRC1	Q96CG8	243 aa		11.61	□□□□□ -0.55
CDK5RAP3-222	ENST00000581708	GAL3ST4	Q96RP7	486 aa		11.61	□□□□□ -0.55

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