RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 SNAI3Q3KNW1 292 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 GLIPR1L2Q4G1C9 344 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 NEK5Q6P3R8 708 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 GPRIN3Q6ZVF9 776 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 NUFIP2Q7Z417 695 aaKnown RBP3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 ADGRD2Q7Z7M1 963 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 SLC22A16Q86VW1 577 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 CATSPER3Q86XQ3 398 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 ELMOD2Q8IZ81 293 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 ABHD12Q8N2K0 398 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 OR1K1Q8NGR3 316 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 OR4F5Q8NH21 305 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 FBXO25Q8TCJ0 367 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 TMEM186Q96B77 213 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 DEFB118Q96PH6 123 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 ATF6BQ99941 703 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 OCR1Q9BZK8 76 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 LRRCC1Q9C099 1032 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 DCTPP1Q9H773 170 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 JPT2Q9H910 190 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 SP140LQ9H930 580 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 GTSE1Q9NYZ3 720 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 NINJ2Q9NZG7 142 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 MGAT4AQ9UM21 535 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 ENTPD4Q9Y227 616 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 SLC6A5Q9Y345 797 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 PCNX3Q9H6A9 2034 aa3.8□□□□□ -1.8
SMCHD1-205ENST00000581383 RNF103-CHMP3A0A140T963 221 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 TEX48A0A1B0GUV7 120 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 A0A1B0GVY2 172 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 RPL37AP8A6NKH3 93 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 K7ERI5 159 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 TSPAN2O60636 221 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 CRLF1O75462 422 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 CXCL10P02778 98 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 OR9G9P0C7N8 305 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 ZCCHC18P0CG32 403 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 TRIM23P36406 574 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 SLC1A4P43007 532 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 ATXN3P54252 364 aaPredicted RBP3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 CDKL1Q00532 357 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 FCHO2Q0JRZ9 810 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 POM121L1PQ3SYA9 428 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 CCDC92Q53HC0 331 aaPredicted RBP3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 UNC50Q53HI1 259 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 TCHHL1Q5QJ38 904 aaPredicted RBP3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 ASRGL1Q7L266 308 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 Q8N377 158 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 LRRC17Q8N6Y2 441 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 SAMD12Q8N8I0 201 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 MAPK1IP1LQ8NDC0 245 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 P3H4Q92791 437 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 TMEM45BQ96B21 275 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 HSD17B14Q9BPX1 270 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 CBWD1Q9BRT8 395 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 NACA2Q9H009 215 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 HEXA-AS1Q9H8Q6 139 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 TAS2R16Q9NYV7 291 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 CLIP2Q9UDT6 1046 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 RARRES3Q9UL19 164 aa3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.79□□□□□ -1.8
SMCHD1-205ENST00000581383 CACNA1FO60840 1977 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 PI15O43692 258 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 FRAT2O75474 233 aaPredicted RBP3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 HPRP00739 348 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 IGHG1P01857 330 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 MAPK3P27361 379 aaPredicted RBP3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 PRDX6P30041 224 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 NPY2RP49146 381 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 NDST1P52848 882 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 KRTAP10-3P60369 221 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 ACY1Q03154 408 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 HKDC1Q2TB90 917 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 PARP10Q53GL7 1025 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 LIPKQ5VXJ0 399 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 ISLR2Q6UXK2 745 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 TIPARPQ7Z3E1 657 aaKnown RBP3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 YRDCQ86U90 279 aaKnown RBP3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 ZSCAN30Q86W11 494 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 LMNTD2Q8IXW0 634 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 SPAG16Q8N0X2 631 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 HDDC3Q8N4P3 179 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 RDH11Q8TC12 318 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 TMEM37Q8WXS4 190 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 PHYHIPQ92561 330 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 CAPNS2Q96L46 248 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 FAM111AQ96PZ2 611 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 FTHL17Q9BXU8 183 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 NLNQ9BYT8 704 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 KRT23Q9C075 422 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 PAK5Q9P286 719 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 PLA2G4CQ9UP65 541 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 PIN4Q9Y237 131 aaKnown RBP3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 KLHDC2Q9Y2U9 406 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 PTPRUQ92729 1446 aa3.78□□□□□ -1.8
SMCHD1-205ENST00000581383 AFF2P51816 1311 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 PRPSAP2O60256 369 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 STAM2O75886 525 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 TGFAP01135 160 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms