RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 SNX6Q9UNH7 406 aa10.64□□□□□ -0.71
SSH2-208ENST00000579040 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.64□□□□□ -0.71
SSH2-208ENST00000579040 DCHS2Q6V1P9 2916 aa10.64□□□□□ -0.71
SSH2-208ENST00000579040 ANKRD17O75179 2603 aaKnown RBP10.63□□□□□ -0.71
SSH2-208ENST00000579040 FBN2P35556 2912 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 EXOC1LA0A1B0GW35 172 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 WASHC1A8K0Z3 465 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 A8MT66 165 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 CAPN14A8MX76 684 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 NPIPA2E9PIF3 369 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 NPIPA3F8WFD2 350 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 TP53I11O14683 189 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 PGRMC2O15173 223 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 GBAP04062 536 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 CLPSP04118 112 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 KLK1P06870 262 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 HOXD4P09016 255 aaPredicted RBP10.63□□□□□ -0.71
SSH2-208ENST00000579040 ELAVL4P26378 380 aaKnown RBP10.63□□□□□ -0.71
SSH2-208ENST00000579040 ACVR2AP27037 513 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 PIGAP37287 484 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 MAN2A2P49641 1150 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 TMED10P49755 219 aaKnown RBP10.63□□□□□ -0.71
SSH2-208ENST00000579040 MAPK12P53778 367 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 KCNJ2P63252 427 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 FUT7Q11130 342 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 NTRK2Q16620 822 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 GXYLT1Q4G148 440 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 TBCELQ5QJ74 424 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 CCNYL2Q5T2Q4 361 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 TIFABQ6ZNK6 161 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 TRMT10CQ7L0Y3 403 aaKnown RBP10.63□□□□□ -0.71
SSH2-208ENST00000579040 ZNF295-AS1Q8N0V1 137 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 ZNF441Q8N8Z8 693 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 FAM13CQ8NE31 585 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 C17orf47Q8NEP4 570 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 OR5M3Q8NGP4 307 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 LILRB4Q8NHJ6 448 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 SARAFQ96BY9 339 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 LURAP1Q96LR2 239 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 MRPL1Q9BYD6 325 aaKnown RBP10.63□□□□□ -0.71
SSH2-208ENST00000579040 ZNF703Q9H7S9 590 aaPredicted RBP10.63□□□□□ -0.71
SSH2-208ENST00000579040 ZFP64Q9NPA5 681 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 PNPLA3Q9NST1 481 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 NMRK1Q9NWW6 199 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 B4GALT7Q9UBV7 327 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 TRPS1Q9UHF7 1281 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 SLC12A4Q9UP95 1085 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 RNF6Q9Y252 685 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 LIPGQ9Y5X9 500 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 CHCHD2Q9Y6H1 151 aaPredicted RBP10.63□□□□□ -0.71
SSH2-208ENST00000579040 PDZD2O15018 2839 aa10.63□□□□□ -0.71
SSH2-208ENST00000579040 CCDC168Q8NDH2 2452 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 TRGV5A0A0B4J1U4 118 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 C2orf92A0A1B0GVN3 265 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 ATP6AP2A0A1C7CYW4 349 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 C1orf226A1L170 272 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 ANKRD33BA6NCL7 494 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 GOLGA6L10A6NI86 522 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 LRRC3CA6NJW4 275 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 FOXO6A8MYZ6 492 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 WDR1O75083 606 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 ATP6AP2O75787 350 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 SBK3P0C264 359 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 HSD3B1P14060 373 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 CPMP14384 443 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 PORP16435 677 aaPredicted RBP10.62□□□□□ -0.71
SSH2-208ENST00000579040 TAC1P20366 129 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 HSD3B2P26439 372 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 SSTR4P31391 388 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 XKP51811 444 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 NR0B1P51843 470 aaKnown RBP10.62□□□□□ -0.71
SSH2-208ENST00000579040 NUP107P57740 925 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 WLSQ5T9L3 541 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 PRAMEF20Q5VT98 475 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 HLA-DQA1Q5Y7H0 255 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 LETMD1Q6P1Q0 360 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 B3GNT6Q6ZMB0 384 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 MEX3BQ6ZN04 569 aaKnown RBP10.62□□□□□ -0.71
SSH2-208ENST00000579040 COMMD6Q7Z4G1 85 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 LRRC25Q8N386 305 aaPredicted RBP10.62□□□□□ -0.71
SSH2-208ENST00000579040 TMEM151AQ8N4L1 468 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 OR7G1Q8NGA0 311 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 OR10G3Q8NGC4 313 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 UHMK1Q8TAS1 419 aaKnown RBP10.62□□□□□ -0.71
SSH2-208ENST00000579040 DOK4Q8TEW6 326 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 SELENOMQ8WWX9 145 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 ZNF597Q96LX8 424 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 SECISBP2Q96T21 854 aaKnown RBP10.62□□□□□ -0.71
SSH2-208ENST00000579040 LDAHQ9H6V9 325 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 ACKR4Q9NPB9 350 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 ACAD8Q9UKU7 415 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 CNOT11Q9UKZ1 510 aaKnown RBP10.62□□□□□ -0.71
SSH2-208ENST00000579040 PCDHGB3Q9Y5G1 929 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 PCDHA9Q9Y5H5 950 aa10.62□□□□□ -0.71
SSH2-208ENST00000579040 ADGRG4Q8IZF6 3080 aa10.61□□□□□ -0.71
SSH2-208ENST00000579040 POLQO75417 2590 aa10.61□□□□□ -0.71
SSH2-208ENST00000579040 A0A1B0GTL3 188 aa10.61□□□□□ -0.71
SSH2-208ENST00000579040 FAM47E-STBD1D6RA91 191 aa10.61□□□□□ -0.71
SSH2-208ENST00000579040 PDYNP01213 254 aa10.61□□□□□ -0.71
SSH2-208ENST00000579040 CELA3AP09093 270 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms