RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 OR5M3Q8NGP4 307 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 OR8K3Q8NH51 312 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 ZNF721Q8TF20 911 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 C16orf78Q8WTQ4 265 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 NR4A3Q92570 626 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 APIPQ96GX9 242 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 MAGED4Q96JG8 741 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 SGCZQ96LD1 299 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 RASL10BQ96S79 203 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 MECRQ9BV79 373 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 TMEM109Q9BVC6 243 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 GATA5Q9BWX5 397 aaPredicted RBP6.08□□□□□ -1.44
TRAF4-213ENST00000578917 EBPLQ9BY08 206 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 CXorf21Q9HAI6 301 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 MIEF1Q9NQG6 463 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 ZNF223Q9UK11 482 aaPredicted RBP6.08□□□□□ -1.44
TRAF4-213ENST00000578917 RAB21Q9UL25 225 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 ENTPD4Q9Y227 616 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 SLC5A6Q9Y289 635 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 TRAF6Q9Y4K3 522 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 CLDN16Q9Y5I7 305 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 PCSK5Q92824 1860 aa6.08□□□□□ -1.44
TRAF4-213ENST00000578917 SPTBN1Q01082 2364 aaKnown RBP6.07□□□□□ -1.44
TRAF4-213ENST00000578917 A0A1B0GUH1 482 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 OR6C76A6NM76 312 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 TP53I11O14683 189 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 ASNA1O43681 348 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 NPHS1O60500 1241 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 CDC40O60508 579 aaKnown RBP eCLIP6.07□□□□□ -1.44
TRAF4-213ENST00000578917 SEMA7AO75326 666 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 PDE9AO76083 593 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 BPGMP07738 259 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 ESRRAP11474 423 aaPredicted RBP6.07□□□□□ -1.44
TRAF4-213ENST00000578917 CREB1P16220 341 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 ABOP16442 354 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 CNR1P21554 472 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 MST1P26927 711 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 SSTR4P31391 388 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 TIA1P31483 386 aaKnown RBP eCLIP6.07□□□□□ -1.44
TRAF4-213ENST00000578917 GALNSP34059 522 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 MEOX1P50221 254 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 NR0B1P51843 470 aaKnown RBP6.07□□□□□ -1.44
TRAF4-213ENST00000578917 SLC37A1P57057 533 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 PPIAP62937 165 aaKnown RBP6.07□□□□□ -1.44
TRAF4-213ENST00000578917 KCNJ2P63252 427 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 MPEG1Q2M385 716 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 SPRED3Q2MJR0 410 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.07□□□□□ -1.44
TRAF4-213ENST00000578917 GALNTL6Q49A17 601 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 SH2D4BQ5SQS7 431 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 HHATQ5VTY9 493 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 FAM219BQ5XKK7 198 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 SLC22A10Q63ZE4 541 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 NOXRED1Q6NXP6 359 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 FAM180BQ6P0A1 224 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 PAOXQ6QHF9 649 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 GK5Q6ZS86 529 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 ZCCHC23Q6ZST2 131 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 FAM47EQ6ZV65 393 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 TRIM46Q7Z4K8 759 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 C9orf40Q8IXQ3 194 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 CCDC116Q8IYX3 515 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 ARMC10Q8N2F6 343 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 VWA5B2Q8N398 1253 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 CPSF7Q8N684 471 aaKnown RBP6.07□□□□□ -1.44
TRAF4-213ENST00000578917 SLC15A4Q8N697 577 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 POGLUT1Q8NBL1 392 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 PSD4Q8NDX1 1056 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 OR7G1Q8NGA0 311 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 FAM76AQ8TAV0 307 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 NUBPLQ8TB37 319 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 SSC4DQ8WTU2 575 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 SCMH1Q96GD3 660 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 JSRP1Q96MG2 331 aaPredicted RBP6.07□□□□□ -1.44
TRAF4-213ENST00000578917 ZIM3Q96PE6 472 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 BARD1Q99728 777 aaKnown RBP6.07□□□□□ -1.44
TRAF4-213ENST00000578917 WWTR1Q9GZV5 400 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 OR10A5Q9H207 317 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 TRIM45Q9H8W5 580 aaPredicted RBP6.07□□□□□ -1.44
TRAF4-213ENST00000578917 LRTM1Q9HBL6 345 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 SLC35C2Q9NQQ7 365 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 SACM1LQ9NTJ5 587 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 C1orf109Q9NX04 203 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 MKS1Q9NXB0 559 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 SH3BGRL2Q9UJC5 107 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 CFL2Q9Y281 166 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 WBP11Q9Y2W2 641 aaKnown RBP6.07□□□□□ -1.44
TRAF4-213ENST00000578917 POLR3HQ9Y535 204 aaPredicted RBP6.07□□□□□ -1.44
TRAF4-213ENST00000578917 PTPN13Q12923 2485 aa6.07□□□□□ -1.44
TRAF4-213ENST00000578917 TNRC6AQ8NDV7 1962 aaKnown RBP6.07□□□□□ -1.44
TRAF4-213ENST00000578917 MAST4O15021 2626 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 A0A1W2PS29 197 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 SERTM1A2A2V5 107 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 TMEM200CA6NKL6 621 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 TMEM114B3SHH9 223 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 ACOT7O00154 380 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 CCL21O00585 134 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 TM9SF1O15321 606 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 BIRC5O15392 142 aa6.06□□□□□ -1.44
TRAF4-213ENST00000578917 AKAP10O43572 662 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms