RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 ASF1BQ9NVP2 202 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 GPR83Q9NYM4 423 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 ACTR10Q9NZ32 417 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 ACTR3BQ9P1U1 418 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 EPHA6Q9UF33 1036 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 ATP6V1HQ9UI12 483 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 BTNL2Q9UIR0 455 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 PCDHGB7Q9Y5F8 929 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 SPTBP11277 2137 aa9.58□□□□□ -0.88
SS18-210ENST00000578700 POLEQ07864 2286 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 SETD2Q9BYW2 2564 aaPredicted RBP9.57□□□□□ -0.88
SS18-210ENST00000578700 IGKV1-8A0A0C4DH67 115 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 A0A0J9YY10 115 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 ANKUB1A6NFN9 424 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 GABRR3A8MPY1 467 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 RNASET2O00584 256 aaKnown RBP9.57□□□□□ -0.88
SS18-210ENST00000578700 PLPP1O14494 284 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 ACOT8O14734 319 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 GBAP04062 536 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 IL3P08700 152 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 DRD2P14416 443 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 HOXB6P17509 224 aaKnown RBP9.57□□□□□ -0.88
SS18-210ENST00000578700 POU3F2P20265 443 aaPredicted RBP9.57□□□□□ -0.88
SS18-210ENST00000578700 IL10P22301 178 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 PSMA4P25789 261 aaKnown RBP9.57□□□□□ -0.88
SS18-210ENST00000578700 ELAVL4P26378 380 aaKnown RBP9.57□□□□□ -0.88
SS18-210ENST00000578700 HTR1EP28566 365 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 PEBP1P30086 187 aaKnown RBP9.57□□□□□ -0.88
SS18-210ENST00000578700 BCL6P41182 706 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 GRIA3P42263 894 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 ERFP50548 548 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 PLA2G16P53816 162 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 ITGA1P56199 1179 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 MTPNP58546 118 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 YBX1P67809 324 aaKnown RBP9.57□□□□□ -0.88
SS18-210ENST00000578700 MRPS22P82650 360 aaKnown RBP9.57□□□□□ -0.88
SS18-210ENST00000578700 MS4A2Q01362 244 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 RELAQ04206 551 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 KLC1Q07866 573 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 SLC9A5Q14940 896 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 MUM1Q2TAK8 710 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 RUNDC3AQ59EK9 446 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 MTX3Q5HYI7 312 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 TOR1AIP1Q5JTV8 583 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 LRIF1Q5T3J3 769 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 ZNF425Q6IV72 752 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 SPESP1Q6UW49 350 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 LRRC74BQ6ZQY2 392 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 ASPGQ86U10 573 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 ANKRD46Q86W74 232 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 BPHLQ86WA6 291 aaPredicted RBP9.57□□□□□ -0.88
SS18-210ENST00000578700 PAQR7Q86WK9 346 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 SLC38A9Q8NBW4 561 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 CAMKVQ8NCB2 501 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 CATSPER1Q8NEC5 780 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 OR2T12Q8NG77 320 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 OR2L5Q8NG80 312 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 PNPLA2Q96AD5 504 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 COQ8BQ96D53 544 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 NSMCE2Q96MF7 247 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 CCDC115Q96NT0 180 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 FCRL4Q96PJ5 515 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 OR2A14Q96R47 310 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 NRTNQ99748 197 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 SLC7A5P2Q9GIP4 190 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 PCDHAC1Q9H158 963 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 RAD21L1Q9H4I0 556 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 SOHLH2Q9NX45 425 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 C6orf203Q9P0P8 240 aaPredicted RBP9.57□□□□□ -0.88
SS18-210ENST00000578700 SLAMF8Q9P0V8 285 aa9.57□□□□□ -0.88
SS18-210ENST00000578700 NKX1-2Q9UD57 310 aaPredicted RBP9.57□□□□□ -0.88
SS18-210ENST00000578700 ZNF282Q9UDV7 671 aaPredicted RBP9.57□□□□□ -0.88
SS18-210ENST00000578700 MDC1Q14676 2089 aaKnown RBP9.56□□□□□ -0.88
SS18-210ENST00000578700 LRIT2A6NDA9 550 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 OR5K3A6NET4 321 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 WIPF3A6NGB9 483 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 MEN1O00255 615 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 ARPC2O15144 300 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 ERI3O43414 337 aaKnown RBP9.56□□□□□ -0.88
SS18-210ENST00000578700 LCMT2O60294 686 aaKnown RBP9.56□□□□□ -0.88
SS18-210ENST00000578700 GPIP06744 558 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 ZCCHC18P0CG32 403 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 UMPSP11172 480 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 LAMP1P11279 417 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 DDCP20711 480 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 MAGP20916 626 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 TPP2P29144 1249 aaPredicted RBP9.56□□□□□ -0.88
SS18-210ENST00000578700 OTX2P32243 289 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 GCKP35557 465 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 BSGP35613 385 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 PTDSS1P48651 473 aaKnown RBP9.56□□□□□ -0.88
SS18-210ENST00000578700 ALDH9A1P49189 494 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 HSD11B2P80365 405 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 PDE7AQ13946 482 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 ZIC1Q15915 447 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 CYP51A1Q16850 503 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 TMTC4Q5T4D3 741 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 FAM71E1Q6IPT2 247 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 LCN8Q6JVE9 175 aa9.56□□□□□ -0.88
SS18-210ENST00000578700 ERICH5Q6P6B1 374 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms