RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 C5orf34Q96MH7 638 aa20.59■□□□□ 0.89
SMARCD2-206ENST00000577990 ARGLU1Q9NWB6 273 aaPredicted RBP20.59■□□□□ 0.89
SMARCD2-206ENST00000577990 ZDHHC2Q9UIJ5 367 aa20.59■□□□□ 0.89
SMARCD2-206ENST00000577990 UTS2RQ9UKP6 389 aa20.59■□□□□ 0.89
SMARCD2-206ENST00000577990 PCDHGB6Q9Y5F9 930 aa20.59■□□□□ 0.89
SMARCD2-206ENST00000577990 ZNF780BQ9Y6R6 833 aa20.59■□□□□ 0.89
SMARCD2-206ENST00000577990 TMEM120BA0PK00 339 aa20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 WWP2O00308 870 aa20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 PIP5K1BO14986 540 aa20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 LYPLA1O75608 230 aaPredicted RBP20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 OR2J2O76002 312 aa20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 NEURL1O76050 574 aa20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 HSPA4LO95757 839 aa20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 FEN1P39748 380 aaKnown RBP20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 SSR4P51571 173 aa20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 KIAA0040Q15053 153 aa20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 HHATQ5VTY9 493 aa20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 FAM180AQ6UWF9 173 aa20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 RNF111Q6ZNA4 994 aa20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 C9orf40Q8IXQ3 194 aa20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 FAM26EQ8N5C1 309 aa20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 GALNT11Q8NCW6 608 aa20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 NUBPLQ8TB37 319 aa20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 GRHL3Q8TE85 626 aa20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 CNRIP1Q96F85 164 aaPredicted RBP20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 SCMH1Q96GD3 660 aa20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 BARD1Q99728 777 aaKnown RBP20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 PAIP2Q9BPZ3 127 aaKnown RBP20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 MYNNQ9NPC7 610 aa20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 AGPAT4Q9NRZ5 378 aa20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 WBP11Q9Y2W2 641 aaKnown RBP20.58■□□□□ 0.89
SMARCD2-206ENST00000577990 CROCCQ5TZA2 2017 aa20.58■□□□□ 0.88
SMARCD2-206ENST00000577990 ITM2AO43736 263 aa20.57■□□□□ 0.88
SMARCD2-206ENST00000577990 SLC25A12O75746 678 aa20.57■□□□□ 0.88
SMARCD2-206ENST00000577990 ATP1B1P05026 303 aa20.57■□□□□ 0.88
SMARCD2-206ENST00000577990 CT62P0C5K7 136 aa20.57■□□□□ 0.88
SMARCD2-206ENST00000577990 BGNP21810 368 aa20.57■□□□□ 0.88
SMARCD2-206ENST00000577990 GRK2P25098 689 aa20.57■□□□□ 0.88
SMARCD2-206ENST00000577990 SLC37A1P57057 533 aa20.57■□□□□ 0.88
SMARCD2-206ENST00000577990 ABCE1P61221 599 aaKnown RBP20.57■□□□□ 0.88
SMARCD2-206ENST00000577990 C2orf80Q0P641 193 aa20.57■□□□□ 0.88
SMARCD2-206ENST00000577990 FAM71E1Q6IPT2 247 aa20.57■□□□□ 0.88
SMARCD2-206ENST00000577990 TMEM178AQ8NBL3 297 aa20.57■□□□□ 0.88
SMARCD2-206ENST00000577990 EXOSC8Q96B26 276 aaKnown RBP20.57■□□□□ 0.88
SMARCD2-206ENST00000577990 ZNF681Q96N22 645 aa20.57■□□□□ 0.88
SMARCD2-206ENST00000577990 RASL10BQ96S79 203 aa20.57■□□□□ 0.88
SMARCD2-206ENST00000577990 HES7Q9BYE0 225 aa20.57■□□□□ 0.88
SMARCD2-206ENST00000577990 PFDN4Q9NQP4 134 aa20.57■□□□□ 0.88
SMARCD2-206ENST00000577990 KLHL1Q9NR64 748 aa20.57■□□□□ 0.88
SMARCD2-206ENST00000577990 EHD3Q9NZN3 535 aa20.57■□□□□ 0.88
SMARCD2-206ENST00000577990 OR6C76A6NM76 312 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 LSM1O15116 133 aaKnown RBP20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 RASAL1O95294 804 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 CLPSP04118 112 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 SP1P08047 785 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 H2AFXP16104 143 aaPredicted RBP20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 DDCP20711 480 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 SLC18A1P54219 525 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 RPL38P63173 70 aaKnown RBP20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 DUSP2Q05923 314 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 FUT7Q11130 342 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 AGBL2Q5U5Z8 902 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 SLC25A25Q6KCM7 469 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 FAM180BQ6P0A1 224 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 IKBIPQ70UQ0 350 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 SLC29A4Q7RTT9 530 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 ZNF227Q86WZ6 799 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 SAMD14Q8IZD0 417 aaPredicted RBP20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 CYP4Z2PQ8N1L4 340 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 LRRC25Q8N386 305 aaPredicted RBP20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 BCORP1Q8N888 145 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 ASB15Q8WXK1 588 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 FCRL1Q96LA6 429 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 TAAR6Q96RI8 345 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 GIMAP4Q9NUV9 329 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 ENTPD4Q9Y227 616 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 TMED5Q9Y3A6 229 aa20.56■□□□□ 0.88
SMARCD2-206ENST00000577990 A8MVJ9 347 aa20.55■□□□□ 0.88
SMARCD2-206ENST00000577990 SNUPNO95149 360 aaKnown RBP20.55■□□□□ 0.88
SMARCD2-206ENST00000577990 SSTR4P31391 388 aa20.55■□□□□ 0.88
SMARCD2-206ENST00000577990 WDR4P57081 412 aaKnown RBP20.55■□□□□ 0.88
SMARCD2-206ENST00000577990 MPEG1Q2M385 716 aa20.55■□□□□ 0.88
SMARCD2-206ENST00000577990 PRICKLE4Q2TBC4 344 aa20.55■□□□□ 0.88
SMARCD2-206ENST00000577990 XKR7Q5GH72 579 aa20.55■□□□□ 0.88
SMARCD2-206ENST00000577990 GPALPP1Q8IXQ4 340 aa20.55■□□□□ 0.88
SMARCD2-206ENST00000577990 OR7G1Q8NGA0 311 aa20.55■□□□□ 0.88
SMARCD2-206ENST00000577990 MGARPQ8TDB4 240 aa20.55■□□□□ 0.88
SMARCD2-206ENST00000577990 FAR1Q8WVX9 515 aa20.55■□□□□ 0.88
SMARCD2-206ENST00000577990 TMEM125Q96AQ2 219 aa20.55■□□□□ 0.88
SMARCD2-206ENST00000577990 GAL3ST4Q96RP7 486 aa20.55■□□□□ 0.88
SMARCD2-206ENST00000577990 BRINP2Q9C0B6 783 aa20.55■□□□□ 0.88
SMARCD2-206ENST00000577990 ZNF395Q9H8N7 513 aaPredicted RBP20.55■□□□□ 0.88
SMARCD2-206ENST00000577990 SLC35C2Q9NQQ7 365 aa20.55■□□□□ 0.88
SMARCD2-206ENST00000577990 HPF1Q9NWY4 346 aa20.55■□□□□ 0.88
SMARCD2-206ENST00000577990 NKIRAS1Q9NYS0 192 aa20.55■□□□□ 0.88
SMARCD2-206ENST00000577990 MAT2BQ9NZL9 334 aa20.55■□□□□ 0.88
SMARCD2-206ENST00000577990 SVILO95425 2214 aa20.54■□□□□ 0.88
SMARCD2-206ENST00000577990 TCP11X1B4DZS4 312 aa20.54■□□□□ 0.88
SMARCD2-206ENST00000577990 SKAP2O75563 359 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms