RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 ZNF780BQ9Y6R6 833 aa17.92■□□□□ 0.46
SS18-208ENST00000577751 NBASA2RRP1 2371 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 RELNP78509 3460 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 OR6C76A6NM76 312 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 TMEM114B3SHH9 223 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 TCP11X1B4DZS4 312 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 WWP2O00308 870 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 ZNF354AO60765 605 aaPredicted RBP17.91■□□□□ 0.46
SS18-208ENST00000577751 VPS4BO75351 444 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 RASAL1O95294 804 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 DDCP20711 480 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 S1PR1P21453 382 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 NT5EP21589 574 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 GRK2P25098 689 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 SSR4P51571 173 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 ABCE1P61221 599 aaKnown RBP17.91■□□□□ 0.46
SS18-208ENST00000577751 KCNC4Q03721 635 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 C2orf80Q0P641 193 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 RFTN2Q52LD8 501 aaPredicted RBP17.91■□□□□ 0.46
SS18-208ENST00000577751 XKR7Q5GH72 579 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 ZNF324BQ6AW86 544 aaPredicted RBP17.91■□□□□ 0.46
SS18-208ENST00000577751 SLC25A25Q6KCM7 469 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 FAM180BQ6P0A1 224 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 RNF111Q6ZNA4 994 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 TMEM156Q8N614 296 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 ZNF615Q8N8J6 731 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 FAR1Q8WVX9 515 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 CTHRC1Q96CG8 243 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 HES7Q9BYE0 225 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 MAT2BQ9NZL9 334 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 MAP10Q9P2G4 905 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 ZNF639Q9UID6 485 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 VPS4AQ9UN37 437 aa17.91■□□□□ 0.46
SS18-208ENST00000577751 LYPLA1O75608 230 aaPredicted RBP17.9■□□□□ 0.46
SS18-208ENST00000577751 SLC25A12O75746 678 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 SNUPNO95149 360 aaKnown RBP17.9■□□□□ 0.46
SS18-208ENST00000577751 CBX6O95503 412 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 BGNP21810 368 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 SSTR4P31391 388 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 EBPQ15125 230 aaKnown RBP17.9■□□□□ 0.46
SS18-208ENST00000577751 NR6A1Q15406 480 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 PIGGQ5H8A4 983 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 AGBL2Q5U5Z8 902 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 FAM180AQ6UWF9 173 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 IKBIPQ70UQ0 350 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 GPALPP1Q8IXQ4 340 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 DDIASQ8IXT1 998 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 SAMD14Q8IZD0 417 aaPredicted RBP17.9■□□□□ 0.46
SS18-208ENST00000577751 LRRC25Q8N386 305 aaPredicted RBP17.9■□□□□ 0.46
SS18-208ENST00000577751 BCORP1Q8N888 145 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 TMEM178AQ8NBL3 297 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 EGLN2Q96KS0 407 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 C5orf34Q96MH7 638 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 CCT7Q99832 543 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 SLC35C2Q9NQQ7 365 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 KLHL1Q9NR64 748 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 RYDENQ9NUL5 291 aaKnown RBP17.9■□□□□ 0.46
SS18-208ENST00000577751 TAS2R7Q9NYW3 318 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 HAO1Q9UJM8 370 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.9■□□□□ 0.46
SS18-208ENST00000577751 TMED5Q9Y3A6 229 aa17.9■□□□□ 0.46
SS18-208ENST00000577751 ASPDHA6ND91 283 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 NME2P1O60361 137 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 OR6B1O95007 311 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 HSPA4LO95757 839 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 NME2P22392 152 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 TACR1P25103 407 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 SLC1A6P48664 564 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 PRSS53Q2L4Q9 553 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 HHATQ5VTY9 493 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 FAM111BQ6SJ93 734 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 SLC29A4Q7RTT9 530 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 GALNTL5Q7Z4T8 443 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 CCDC116Q8IYX3 515 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 CYP4Z2PQ8N1L4 340 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 ZNF781Q8N8C0 355 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 ANKRD42Q8N9B4 389 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 OR7G1Q8NGA0 311 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 DNAJB8Q8NHS0 232 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 ZNF675Q8TD23 568 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 ASB15Q8WXK1 588 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 EXOSC8Q96B26 276 aaKnown RBP17.89■□□□□ 0.45
SS18-208ENST00000577751 ARL8AQ96BM9 186 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 C3orf30Q96M34 536 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 SORT1Q99523 831 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 SLX1AQ9BQ83 275 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 WWTR1Q9GZV5 400 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 OR10A5Q9H207 317 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 RAP2CQ9Y3L5 183 aa17.89■□□□□ 0.45
SS18-208ENST00000577751 UBR5O95071 2799 aaPredicted RBP17.88■□□□□ 0.45
SS18-208ENST00000577751 NADKO95544 446 aaPredicted RBP17.88■□□□□ 0.45
SS18-208ENST00000577751 GNLYP22749 145 aa17.88■□□□□ 0.45
SS18-208ENST00000577751 SOX3P41225 446 aa17.88■□□□□ 0.45
SS18-208ENST00000577751 RPL38P63173 70 aaKnown RBP17.88■□□□□ 0.45
SS18-208ENST00000577751 STX3Q13277 289 aa17.88■□□□□ 0.45
SS18-208ENST00000577751 MAPKAPK3Q16644 382 aa17.88■□□□□ 0.45
SS18-208ENST00000577751 C6orf163Q5TEZ5 329 aa17.88■□□□□ 0.45
SS18-208ENST00000577751 OPN5Q6U736 354 aa17.88■□□□□ 0.45
SS18-208ENST00000577751 MDGA2Q7Z553 956 aa17.88■□□□□ 0.45
SS18-208ENST00000577751 TICAM1Q8IUC6 712 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms