RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 UBE3DQ7Z6J8 389 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 GPR180Q86V85 440 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 GPSM1Q86YR5 675 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 CIARTQ8N365 385 aaPredicted RBP12.2□□□□□ -0.46
COPS3-214ENST00000577246 C9orf106Q8NAJ2 232 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 ZNF473Q8WTR7 871 aaKnown RBP12.2□□□□□ -0.46
COPS3-214ENST00000577246 NANOS1Q8WY41 292 aaKnown RBP12.2□□□□□ -0.46
COPS3-214ENST00000577246 LRRC39Q96DD0 335 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 DTNBP1Q96EV8 351 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 CMTM7Q96FZ5 175 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 CFAP36Q96G28 342 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 TMEM41AQ96HV5 264 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 PBKQ96KB5 322 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 GNRHR2Q96P88 292 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 DERL2Q9GZP9 239 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 TEX10Q9NXF1 929 aaPredicted RBP12.2□□□□□ -0.46
COPS3-214ENST00000577246 NSMCE4AQ9NXX6 385 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 ASIC3Q9UHC3 531 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 ADGRE2Q9UHX3 823 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 TESMINQ9Y4I5 508 aa12.2□□□□□ -0.46
COPS3-214ENST00000577246 ARHGAP21Q5T5U3 1957 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 A0A1W2PPR1 153 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 H0Y3Z8 333 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 HRKO00198 91 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 PGRMC1O00264 195 aaKnown RBP12.19□□□□□ -0.46
COPS3-214ENST00000577246 RTCAO00442 366 aaKnown RBP12.19□□□□□ -0.46
COPS3-214ENST00000577246 DNALI1O14645 258 aaPredicted RBP12.19□□□□□ -0.46
COPS3-214ENST00000577246 BANF1O75531 89 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 S100BP04271 92 aaPredicted RBP12.19□□□□□ -0.46
COPS3-214ENST00000577246 PCNAP12004 261 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 CPN1P15169 458 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 CHMP24386 653 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 CDC25BP30305 580 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 CASP2P42575 452 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 HSPA7P48741 367 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 PCYT1AP49585 367 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 FBXW4P57775 412 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 TAS2R39P59534 338 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 CHIT1Q13231 466 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 FRG1Q14331 258 aaKnown RBP12.19□□□□□ -0.46
COPS3-214ENST00000577246 ZNF460Q14592 562 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 SETDB1Q15047 1291 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 ACKR1Q16570 336 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 WIPI1Q5MNZ9 446 aaPredicted RBP12.19□□□□□ -0.46
COPS3-214ENST00000577246 KHDRBS2Q5VWX1 349 aaKnown RBP12.19□□□□□ -0.46
COPS3-214ENST00000577246 OR4C11Q6IEV9 310 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 MED27Q6P2C8 311 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 ZC3HC1Q86WB0 502 aaKnown RBP12.19□□□□□ -0.46
COPS3-214ENST00000577246 SPC24Q8NBT2 197 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 OR1J4Q8NGS1 313 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 WNT2BQ93097 391 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 RGMAQ96B86 450 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 TMEM79Q9BSE2 394 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 RBSNQ9H1K0 784 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 WDR41Q9HAD4 459 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 PACSIN3Q9UKS6 424 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 NPFFR2Q9Y5X5 522 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 JMJD1CQ15652 2540 aa12.19□□□□□ -0.46
COPS3-214ENST00000577246 A8MXE2 369 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 TAPBPO15533 448 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 CCNT2O60583 730 aaKnown RBP12.18□□□□□ -0.46
COPS3-214ENST00000577246 GPR75O95800 540 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 TGFB1P01137 390 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 CD22P20273 847 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 CPOXP36551 454 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 ELK3P41970 407 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 CASP3P42574 277 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 ARFIP1P53367 373 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 MGAT5Q09328 741 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 MSS51Q4VC12 460 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 EIPR1Q53HC9 387 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 DCST1Q5T197 706 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 C6orf163Q5TEZ5 329 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 TIGD3Q6B0B8 471 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 TRMT10BQ6PF06 316 aaKnown RBP12.18□□□□□ -0.46
COPS3-214ENST00000577246 DGAT2L6Q6ZPD8 337 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 LRRC70Q7Z2Q7 622 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 IGDCC3Q8IVU1 814 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 LAS2Q8IYD9 372 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 ZCCHC7Q8N3Z6 543 aaKnown RBP12.18□□□□□ -0.46
COPS3-214ENST00000577246 ZNF441Q8N8Z8 693 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 FAM83FQ8NEG4 500 aaPredicted RBP12.18□□□□□ -0.46
COPS3-214ENST00000577246 C17orf47Q8NEP4 570 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 ANKRD49Q8WVL7 239 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 TSPAN17Q96FV3 270 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 PERPQ96FX8 193 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 UCN2Q96RP3 112 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 METTL7AQ9H8H3 244 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 UBTD1Q9HAC8 227 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 LYARQ9NX58 379 aaKnown RBP12.18□□□□□ -0.46
COPS3-214ENST00000577246 CD274Q9NZQ7 290 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 TRPS1Q9UHF7 1281 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 CHMP2BQ9UQN3 213 aa12.18□□□□□ -0.46
COPS3-214ENST00000577246 SAP18O00422 153 aaKnown RBP12.17□□□□□ -0.46
COPS3-214ENST00000577246 MSTNO14793 375 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 CTIFO43310 598 aaKnown RBP12.17□□□□□ -0.46
COPS3-214ENST00000577246 PRAMEF4O60810 478 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 RHOXF2BP0C7M4 288 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 SLC35E2BP0CK96 405 aa12.17□□□□□ -0.46
COPS3-214ENST00000577246 SLC35E2P0CK97 266 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms