RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 GPR143P51810 404 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 ARFIP1P53367 373 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 HSD17B7P56937 341 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 OR4D2P58180 307 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 SLC26A5P58743 744 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 SKP1P63208 163 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 PHEXP78562 749 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 IGLV3-21P80748 117 aaPredicted RBP8.83□□□□□ -1
NPLOC4-219ENST00000576713 FOLH1Q04609 750 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 TGM3Q08188 693 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 BST1Q10588 318 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 AIMP2Q13155 320 aaKnown RBP8.83□□□□□ -1
NPLOC4-219ENST00000576713 SLC13A2Q13183 592 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 MYBPC3Q14896 1274 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 CCNYL2Q5T2Q4 361 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 FCRLBQ6BAA4 426 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 CROCCP2Q86T23 111 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 ZNF595Q8IYB9 648 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 SIRT6Q8N6T7 355 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 CLEC1AQ8NC01 280 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 APCDD1LQ8NCL9 501 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 DNAJB14Q8TBM8 379 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 BRIX1Q8TDN6 353 aaKnown RBP8.83□□□□□ -1
NPLOC4-219ENST00000576713 PTPMT1Q8WUK0 201 aaPredicted RBP8.83□□□□□ -1
NPLOC4-219ENST00000576713 TWIST2Q8WVJ9 160 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 METTL21AQ8WXB1 218 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 PPWD1Q96BP3 646 aaKnown RBP8.83□□□□□ -1
NPLOC4-219ENST00000576713 ATP6V1G3Q96LB4 118 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 MAGEB10Q96LZ2 347 aaPredicted RBP8.83□□□□□ -1
NPLOC4-219ENST00000576713 FER1L6-AS2Q96M78 137 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 IP6K3Q96PC2 410 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 TRMOQ9BU70 441 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 ROGDIQ9GZN7 287 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 RPF2Q9H7B2 306 aaKnown RBP8.83□□□□□ -1
NPLOC4-219ENST00000576713 VIPAS39Q9H9C1 493 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 CES1P1Q9UKY3 287 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 DLGAP4Q9Y2H0 992 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 STK38LQ9Y2H1 464 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 TRAF6Q9Y4K3 522 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 MMACHCQ9Y4U1 282 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 SCN2AQ99250 2005 aa8.83□□□□□ -1
NPLOC4-219ENST00000576713 A0A088AWK7 358 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 ATP6AP2A0A1C7CYW4 349 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 SAGE2PA6NJ88 616 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 PCDH7O60245 1069 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 SKAP2O75563 359 aaPredicted RBP8.82□□□□□ -1
NPLOC4-219ENST00000576713 ATP6AP2O75787 350 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 MYO1DO94832 1006 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 F10P00742 488 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 SERPINE1P05121 402 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 CYC1P08574 325 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 IL3P08700 152 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 NR2F6P10588 404 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 HSD3B1P14060 373 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 ZNF10P21506 573 aaPredicted RBP8.82□□□□□ -1
NPLOC4-219ENST00000576713 HSD3B2P26439 372 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 TIA1P31483 386 aaKnown RBP eCLIP8.82□□□□□ -1
NPLOC4-219ENST00000576713 HPDP32754 393 aaPredicted RBP8.82□□□□□ -1
NPLOC4-219ENST00000576713 SLC18A1P54219 525 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 RRADP55042 308 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 ABCE1P61221 599 aaKnown RBP8.82□□□□□ -1
NPLOC4-219ENST00000576713 NFATC3Q12968 1075 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 BTBD16Q32M84 506 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 NADK2Q4G0N4 442 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 RFTN2Q52LD8 501 aaPredicted RBP8.82□□□□□ -1
NPLOC4-219ENST00000576713 XKR7Q5GH72 579 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 C10orf62Q5T681 223 aaPredicted RBP8.82□□□□□ -1
NPLOC4-219ENST00000576713 NDUFAF5Q5TEU4 345 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 PLAG1Q6DJT9 500 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 GALNT18Q6P9A2 607 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 CYP20A1Q6UW02 462 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 C16orf47Q6ZP98 133 aaPredicted RBP8.82□□□□□ -1
NPLOC4-219ENST00000576713 GBP7Q8N8V2 638 aaPredicted RBP8.82□□□□□ -1
NPLOC4-219ENST00000576713 SIMC1Q8NDZ2 872 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 C9orf43Q8TAL5 461 aaPredicted RBP8.82□□□□□ -1
NPLOC4-219ENST00000576713 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.82□□□□□ -1
NPLOC4-219ENST00000576713 EGLN2Q96KS0 407 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 FCRL1Q96LA6 429 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 SMAD5Q99717 465 aaKnown RBP8.82□□□□□ -1
NPLOC4-219ENST00000576713 PAIP2Q9BPZ3 127 aaKnown RBP8.82□□□□□ -1
NPLOC4-219ENST00000576713 TUBB6Q9BUF5 446 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 SLC25A23Q9BV35 468 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 ALOXE3Q9BYJ1 711 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 ADNPQ9H2P0 1102 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 PNO1Q9NRX1 252 aaKnown RBP8.82□□□□□ -1
NPLOC4-219ENST00000576713 RIC8BQ9NVN3 520 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 PNPOQ9NVS9 261 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 LYARQ9NX58 379 aaKnown RBP8.82□□□□□ -1
NPLOC4-219ENST00000576713 PTGFRNQ9P2B2 879 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 TUBD1Q9UJT1 453 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 ADAM29Q9UKF5 820 aa8.82□□□□□ -1
NPLOC4-219ENST00000576713 POLR3HQ9Y535 204 aaPredicted RBP8.82□□□□□ -1
NPLOC4-219ENST00000576713 PCDHGA9Q9Y5G4 932 aaKnown RBP8.82□□□□□ -1
NPLOC4-219ENST00000576713 COL6A6A6NMZ7 2263 aa8.81□□□□□ -1
NPLOC4-219ENST00000576713 TMEM200CA6NKL6 621 aa8.81□□□□□ -1
NPLOC4-219ENST00000576713 B8ZZF3 427 aa8.81□□□□□ -1
NPLOC4-219ENST00000576713 MKRN2OSH3BPM6 223 aa8.81□□□□□ -1
NPLOC4-219ENST00000576713 LSM1O15116 133 aaKnown RBP8.81□□□□□ -1
NPLOC4-219ENST00000576713 KLF4O43474 513 aa8.81□□□□□ -1
NPLOC4-219ENST00000576713 SNNO75324 88 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms