RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 KRTCAP3Q53RY4 240 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 CMPK2Q5EBM0 449 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 XKR6Q5GH73 641 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 MTFR2Q6P444 385 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 XKRXQ6PP77 449 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 FRA10AC1Q70Z53 315 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 GALNT7Q86SF2 657 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 KLHDC8AQ8IYD2 350 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 LGI4Q8N135 537 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 GHDCQ8N2G8 530 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 RPRMLQ8N4K4 120 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 MARVELD2Q8N4S9 558 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 NKAPQ8N5F7 415 aaKnown RBP5.78□□□□□ -1.48
NUP88-212ENST00000576708 HORMAD2Q8N7B1 307 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 ZNF321PQ8N8H1 164 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 LINC00482Q8N8I6 264 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 FAM98AQ8NCA5 519 aaKnown RBP5.78□□□□□ -1.48
NUP88-212ENST00000576708 APCDD1LQ8NCL9 501 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 HIPK4Q8NE63 616 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 B3GNT7Q8NFL0 401 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 OR52N2Q8NGI0 321 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 DOK4Q8TEW6 326 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 NCLNQ969V3 563 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 RHBDF1Q96CC6 855 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 MS4A6EQ96DS6 147 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 QRFPRQ96P65 431 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 F2RL3Q96RI0 385 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 CSF3RQ99062 836 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 TMEM79Q9BSE2 394 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 DEFB127Q9H1M4 99 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 CHST11Q9NPF2 352 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 PRTFDC1Q9NRG1 225 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 DEPPQ9NTK1 212 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 MOCS1Q9NZB8 636 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 CTNNAL1Q9UBT7 734 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 ZNF490Q9ULM2 529 aaPredicted RBP5.78□□□□□ -1.48
NUP88-212ENST00000576708 CORO1CQ9ULV4 474 aaPredicted RBP5.78□□□□□ -1.48
NUP88-212ENST00000576708 MTO1Q9Y2Z2 717 aaKnown RBP5.78□□□□□ -1.48
NUP88-212ENST00000576708 OARD1Q9Y530 152 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 KCNE2Q9Y6J6 123 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 CREBBPQ92793 2442 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 AKAP9Q99996 3911 aa5.78□□□□□ -1.48
NUP88-212ENST00000576708 APCP25054 2843 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 LRIT2A6NDA9 550 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 URADA6NGE7 173 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 FAM166BA8MTA8 275 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 EFCAB8A8MWE9 144 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 WWP2O00308 870 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 RTCAO00442 366 aaKnown RBP5.77□□□□□ -1.49
NUP88-212ENST00000576708 FCHO1O14526 889 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 TFECO14948 347 aaPredicted RBP5.77□□□□□ -1.49
NUP88-212ENST00000576708 ZNF354AO60765 605 aaPredicted RBP5.77□□□□□ -1.49
NUP88-212ENST00000576708 H2AFYO75367 372 aaKnown RBP5.77□□□□□ -1.49
NUP88-212ENST00000576708 FAM155BO75949 473 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 SEC31AO94979 1220 aaKnown RBP5.77□□□□□ -1.49
NUP88-212ENST00000576708 OR6B1O95007 311 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 WISP3O95389 354 aaPredicted RBP5.77□□□□□ -1.49
NUP88-212ENST00000576708 IFNA16P05015 189 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 TPOP07202 933 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 CCDC166P0CW27 439 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 TCP1P17987 556 aaKnown RBP5.77□□□□□ -1.49
NUP88-212ENST00000576708 GNAZP19086 355 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 EPORP19235 508 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 TFEBP19484 476 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 CD22P20273 847 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 CERS1P27544 350 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 SSTR1P30872 391 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 PTGS2P35354 604 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 PTGER4P35408 488 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 KCNC1P48547 511 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 CLCN2P51788 898 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 GPR143P51810 404 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 RAB38P57729 211 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 GNG11P61952 73 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 SKP1P63208 163 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 CDKL1Q00532 357 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 ID2Q02363 134 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 SLC13A2Q13183 592 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 DOC2AQ14183 400 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 OR4D1Q15615 310 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 ZNF750Q32MQ0 723 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 IL20RBQ6UXL0 311 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 TMIGD1Q6UXZ0 262 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 FKBP9P1Q75LS8 142 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 GDF7Q7Z4P5 450 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 ZBED8Q8IZ13 594 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 CYP4Z2PQ8N1L4 340 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 RNF175Q8N4F7 328 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 STPG3Q8N7X2 389 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 DTX3Q8N9I9 347 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 SNX31Q8N9S9 440 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 EXT2Q93063 718 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 TMEM125Q96AQ2 219 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 SDCCAG3Q96C92 435 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 LRRC39Q96DD0 335 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 VPS39Q96JC1 886 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 FAR2Q96K12 515 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 DMRTA2Q96SC8 542 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 KRT12Q99456 494 aa5.77□□□□□ -1.49
NUP88-212ENST00000576708 TACO1Q9BSH4 297 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms