RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 E7EQ34 232 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 DVL2O14641 736 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 OR12D1P0DN82 309 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 CD8BP10966 210 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 ELAVL4P26378 380 aaKnown RBP13.68□□□□□ -0.22
SMG6-215ENST00000574501 GABRA5P31644 462 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 CDH4P55283 916 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 VSX2P58304 361 aaPredicted RBP13.68□□□□□ -0.22
SMG6-215ENST00000574501 PURAQ00577 322 aaKnown RBP13.68□□□□□ -0.22
SMG6-215ENST00000574501 DSC1Q08554 894 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 OCLNQ16625 522 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 LHFPL3Q86UP9 236 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 SLC30A8Q8IWU4 369 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 WDR20Q8TBZ3 569 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 OTUB1Q96FW1 271 aaPredicted RBP13.68□□□□□ -0.22
SMG6-215ENST00000574501 FUBP3Q96I24 572 aaKnown RBP eCLIP13.68□□□□□ -0.22
SMG6-215ENST00000574501 ZSWIM3Q96MP5 696 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 WRAP53Q9BUR4 548 aaKnown RBP13.68□□□□□ -0.22
SMG6-215ENST00000574501 OR51J1Q9H342 316 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 TRPM5Q9NZQ8 1165 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 ZNF624Q9P2J8 865 aaPredicted RBP13.68□□□□□ -0.22
SMG6-215ENST00000574501 PPIEQ9UNP9 301 aaKnown RBP13.68□□□□□ -0.22
SMG6-215ENST00000574501 OTOFQ9HC10 1997 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 A0A1W2PPL8 197 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 ARRDC5A6NEK1 342 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 ACSL4O60488 711 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 ACSM4P0C7M7 580 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 CFL1P23528 166 aaKnown RBP13.67□□□□□ -0.22
SMG6-215ENST00000574501 BTCP35070 178 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 SOAT1P35610 550 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 PFN3P60673 137 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 HSF2Q03933 536 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 TUSC3Q13454 348 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 TPBGQ13641 420 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 TUSC1Q2TAM9 212 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 ATP13A5Q4VNC0 1218 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 ACSM5Q6NUN0 579 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 DEF8Q6ZN54 512 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 TLK2Q86UE8 772 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 SCMH1Q96GD3 660 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 WFDC6Q9BQY6 131 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 SLC12A9Q9BXP2 914 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 RNF32Q9H0A6 362 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 RC3H2Q9HBD1 1191 aaKnown RBP13.67□□□□□ -0.22
SMG6-215ENST00000574501 MCCC2Q9HCC0 563 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 SPATA6Q9NWH7 488 aaPredicted RBP13.67□□□□□ -0.22
SMG6-215ENST00000574501 FAM8A1Q9UBU6 413 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 GPR52Q9Y2T5 361 aa13.67□□□□□ -0.22
SMG6-215ENST00000574501 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.66□□□□□ -0.22
SMG6-215ENST00000574501 M0QZ92 97 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 RNASET2O00584 256 aaKnown RBP13.66□□□□□ -0.22
SMG6-215ENST00000574501 EEF1E1O43324 174 aaKnown RBP13.66□□□□□ -0.22
SMG6-215ENST00000574501 IFNA14P01570 189 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 FCER2P06734 321 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 DNASE1P24855 282 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 GBX2P52951 348 aaPredicted RBP13.66□□□□□ -0.22
SMG6-215ENST00000574501 MRPS6P82932 125 aaKnown RBP13.66□□□□□ -0.22
SMG6-215ENST00000574501 LSM11P83369 360 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMG6-215ENST00000574501 ZNF177Q13360 481 aaPredicted RBP13.66□□□□□ -0.22
SMG6-215ENST00000574501 NTRK2Q16620 822 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 IDNKQ5T6J7 187 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 PGBD2Q6P3X8 592 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 KANSL1Q7Z3B3 1105 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 MEX3DQ86XN8 651 aaKnown RBP13.66□□□□□ -0.22
SMG6-215ENST00000574501 HSD17B8Q92506 261 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 OTULINQ96BN8 352 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 NXPE2Q96DL1 559 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 RNFT2Q96EX2 444 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 C11orf24Q96F05 449 aaPredicted RBP13.66□□□□□ -0.22
SMG6-215ENST00000574501 RSPO3Q9BXY4 272 aaPredicted RBP13.66□□□□□ -0.22
SMG6-215ENST00000574501 BEX1Q9HBH7 125 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 SGK2Q9HBY8 427 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 SEMA3GQ9NS98 782 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 IMP3Q9NV31 184 aaKnown RBP13.66□□□□□ -0.22
SMG6-215ENST00000574501 ZSCAN32Q9NX65 697 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 PHF11Q9UIL8 331 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 KCND3Q9UK17 655 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 TEX13CA0A0J9YWL9 993 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 A0A1W2PRG6 482 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 FZD6O60353 706 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 B4GALT3O60512 393 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 DDNO94850 711 aaPredicted RBP13.66□□□□□ -0.22
SMG6-215ENST00000574501 IFNA16P05015 189 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 KELP23276 732 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 FGF9P31371 208 aaPredicted RBP13.66□□□□□ -0.22
SMG6-215ENST00000574501 ASMTP46597 345 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 RHOAP61586 193 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 RPS26P62854 115 aaKnown RBP13.66□□□□□ -0.22
SMG6-215ENST00000574501 CAMK2DQ13557 499 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 GINS1Q14691 196 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 RNASE12Q5GAN4 147 aaKnown RBP13.66□□□□□ -0.22
SMG6-215ENST00000574501 C3orf38Q5JPI3 329 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 MZT2AQ6P582 158 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 TRIM40Q6P9F5 258 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 GET4Q7L5D6 327 aaPredicted RBP13.66□□□□□ -0.22
SMG6-215ENST00000574501 GPC2Q8N158 579 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 PIAS4Q8N2W9 510 aaPredicted RBP13.66□□□□□ -0.22
SMG6-215ENST00000574501 NXPE1Q8N323 547 aa13.66□□□□□ -0.22
SMG6-215ENST00000574501 SRFBP1Q8NEF9 429 aaKnown RBP13.66□□□□□ -0.22
SMG6-215ENST00000574501 OR8K5Q8NH50 307 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms