RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 CCDC127Q96BQ5 260 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 PYCR2Q96C36 320 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 SLC25A36Q96CQ1 311 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 SH3YL1Q96HL8 342 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 HRASLS5Q96KN8 279 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 ZNF578Q96N58 590 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 GFI1Q99684 422 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 NAPGQ99747 312 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 PRMT1Q99873 361 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 CTRCQ99895 268 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 SYT3Q9BQG1 590 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 NAT9Q9BTE0 207 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 LMF2Q9BU23 707 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 NDUFAF3Q9BU61 184 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 SLC2A11Q9BYW1 496 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 FRMD8Q9BZ67 464 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 TPSD1Q9BZJ3 242 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 ILKAPQ9H0C8 392 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 OR2AG1Q9H205 316 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 RRAGCQ9HB90 399 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 MRPL40Q9NQ50 206 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 ACSS1Q9NUB1 689 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 PARPBPQ9NWS1 579 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 PLEK2Q9NYT0 353 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 PTTG3PQ9NZH4 202 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 SLC17A7Q9P2U7 560 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 GAGE2DQ9UEU5 116 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 APOBEC3BQ9UH17 382 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 PHF11Q9UIL8 331 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 GPR160Q9UJ42 338 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 IKZF2Q9UKS7 526 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 ZNF346Q9UL40 294 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 ACSL5Q9ULC5 683 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 POFUT2Q9Y2G5 429 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 PLLPQ9Y342 182 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 DUSP10Q9Y6W6 482 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 MAP3K15Q6ZN16 1313 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 PNPLA6Q8IY17 1366 aa4.65□□□□□ -1.66
TOPBP1-210ENST00000572787 ANKRD30AQ9BXX3 1397 aa4.65□□□□□ -1.66
TOPBP1-210ENST00000572787 A0A0G2JLW4 131 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 MTMR11A4FU01 709 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 ZNF840PA6NDX5 716 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 FRG2CA6NGY1 282 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 HHLA1C9JL84 531 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 J3QR06 171 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 BTN3A3O00478 584 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 AIM2O14862 343 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 CHUKO15111 745 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 HSPA12AO43301 675 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 SUV39H1O43463 412 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 DENRO43583 198 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 LPXNO60711 386 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 GRAP2O75791 330 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 PLA2G1BP04054 148 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 ANXA5P08758 320 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 CNR1P21554 472 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 CFL1P23528 166 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 HRH2P25021 359 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 RPL13P26373 211 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 PCK1P35558 622 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 SLC1A4P43007 532 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 UQCRFS1P47985 274 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 TUFMP49411 452 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 METAP2P50579 478 aaKnown RBP eCLIP4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 CLDN15P56746 228 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 S100A12P80511 92 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 HGFACQ04756 655 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 SIGLEC14Q08ET2 396 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 SLAMF1Q13291 335 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 VEZF1Q14119 521 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 CSRP2Q16527 193 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 CYP1B1Q16678 543 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 GOLGA7BQ2TAP0 167 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 PTPN20Q4JDL3 420 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 LINC01620Q4KN68 170 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 TEDDM1Q5T9Z0 273 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 RNLSQ5VYX0 342 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 PAPD7Q5XG87 772 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 GGNBP1Q5YKI7 109 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 TIGD3Q6B0B8 471 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 NADSYN1Q6IA69 706 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 FAM109BQ6ICB4 259 aaPredicted RBP4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 TCTN3Q6NUS6 607 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 FAM71F2Q6NXP2 309 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 METTL2BQ6P1Q9 378 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 VITQ6UXI7 678 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 ZNF534Q76KX8 674 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 H2BFWTQ7Z2G1 175 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 MRPL21Q7Z2W9 205 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 TMPRSS11BQ86T26 416 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 SERPINA9Q86WD7 417 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 MAP7D3Q8IWC1 876 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 MFSD6LQ8IWD5 586 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 FBXL6Q8N531 539 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 ALLCQ8N6M5 410 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 CCDC185Q8N715 623 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 TXNDC5Q8NBS9 432 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 SCCPDHQ8NBX0 429 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 FBXO36Q8NEA4 188 aa4.65□□□□□ -1.67
TOPBP1-210ENST00000572787 OR5AU1Q8NGC0 362 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms