RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 NXNQ6DKJ4 435 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 ACAD11Q709F0 780 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 GALNTL5Q7Z4T8 443 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 UBE3DQ7Z6J8 389 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 ZNF595Q8IYB9 648 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 TMEM178AQ8NBL3 297 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 MAELQ96JY0 434 aaKnown RBP14.07□□□□□ -0.16
RAB40B-203ENST00000570676 PPP3R2Q96LZ3 170 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 OR52B2Q96RD2 323 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 AKTIPQ9H8T0 292 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 COPS7BQ9H9Q2 264 aaPredicted RBP14.07□□□□□ -0.16
RAB40B-203ENST00000570676 LRFN1Q9P244 771 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 SEC14L3Q9UDX4 400 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 GIMAP2Q9UG22 337 aa14.07□□□□□ -0.16
RAB40B-203ENST00000570676 TRBV11-1A0A0K0K1C0 115 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 A0A1B0GUH1 482 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 SAP18O00422 153 aaKnown RBP14.06□□□□□ -0.16
RAB40B-203ENST00000570676 CDK2AP1O14519 115 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 LSM1O15116 133 aaKnown RBP14.06□□□□□ -0.16
RAB40B-203ENST00000570676 NME2P1O60361 137 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 SEC22BO75396 215 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 SLC25A12O75746 678 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 SCELO95171 688 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 SP1P08047 785 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 CD46P15529 392 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 NME2P22392 152 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 RAP1GDS1P52306 607 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 AP5B1Q2VPB7 878 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 GALNTL6Q49A17 601 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 PIGWQ7Z7B1 504 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 CLNKQ7Z7G1 428 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 SIAH3Q8IW03 269 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 BCAS4Q8TDM0 211 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 ACTRT2Q8TDY3 377 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 C10orf82Q8WW14 230 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 RILPQ96NA2 401 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 CENPKQ9BS16 269 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 CCDC28BQ9BUN5 200 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 MRPL1Q9BYD6 325 aaKnown RBP14.06□□□□□ -0.16
RAB40B-203ENST00000570676 LRTM1Q9HBL6 345 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 ADAP2Q9NPF8 381 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 TCF7L2Q9NQB0 619 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 C1orf109Q9NX04 203 aa14.06□□□□□ -0.16
RAB40B-203ENST00000570676 MRPS33Q9Y291 106 aaKnown RBP14.06□□□□□ -0.16
RAB40B-203ENST00000570676 MYO7BQ6PIF6 2116 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 NPIPB8E9PQR5 432 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 RTCAO00442 366 aaKnown RBP14.05□□□□□ -0.16
RAB40B-203ENST00000570676 NDUFAB1O14561 156 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 PRKNO60260 465 aaPredicted RBP14.05□□□□□ -0.16
RAB40B-203ENST00000570676 SEMA3DO95025 777 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 LBPP18428 481 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 PRPH2P23942 346 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 CA7P43166 264 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 HLCSP50747 726 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 CLCN2P51788 898 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 TGM3Q08188 693 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 TBL3Q12788 808 aaKnown RBP14.05□□□□□ -0.16
RAB40B-203ENST00000570676 SLC13A2Q13183 592 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 LSM12Q3MHD2 195 aaKnown RBP14.05□□□□□ -0.16
RAB40B-203ENST00000570676 C6orf136Q5SQH8 315 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 GKAP1Q5VSY0 366 aaPredicted RBP14.05□□□□□ -0.16
RAB40B-203ENST00000570676 SLC25A25Q6KCM7 469 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 LARP4Q71RC2 724 aaKnown RBP eCLIP14.05□□□□□ -0.16
RAB40B-203ENST00000570676 CEP70Q8NHQ1 597 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 STON2Q8WXE9 905 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 NCLNQ969V3 563 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 RGMAQ96B86 450 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 VMP1Q96GC9 406 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 APIPQ96GX9 242 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 GPR137Q96N19 417 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 KCNC2Q96PR1 638 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 TBCDQ9BTW9 1192 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 DEFB126Q9BYW3 111 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 TSPAN10Q9H1Z9 355 aaPredicted RBP14.05□□□□□ -0.16
RAB40B-203ENST00000570676 LYRM4Q9HD34 91 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 PNO1Q9NRX1 252 aaKnown RBP14.05□□□□□ -0.16
RAB40B-203ENST00000570676 AHSPQ9NZD4 102 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 KCMF1Q9P0J7 381 aa14.05□□□□□ -0.16
RAB40B-203ENST00000570676 CLDN4O14493 209 aa14.04□□□□□ -0.16
RAB40B-203ENST00000570676 PLPP1O14494 284 aa14.04□□□□□ -0.16
RAB40B-203ENST00000570676 ATP5A1P25705 553 aaKnown RBP14.04□□□□□ -0.16
RAB40B-203ENST00000570676 CYB561P49447 251 aa14.04□□□□□ -0.16
RAB40B-203ENST00000570676 RPL38P63173 70 aaKnown RBP14.04□□□□□ -0.16
RAB40B-203ENST00000570676 ACSM2AQ08AH3 577 aa14.04□□□□□ -0.16
RAB40B-203ENST00000570676 ELAVL1Q15717 326 aaKnown RBP14.04□□□□□ -0.16
RAB40B-203ENST00000570676 RFTN2Q52LD8 501 aaPredicted RBP14.04□□□□□ -0.16
RAB40B-203ENST00000570676 SPIN4Q56A73 249 aa14.04□□□□□ -0.16
RAB40B-203ENST00000570676 ACSM2BQ68CK6 577 aa14.04□□□□□ -0.16
RAB40B-203ENST00000570676 METTL4Q8N3J2 472 aa14.04□□□□□ -0.16
RAB40B-203ENST00000570676 CPSF7Q8N684 471 aaKnown RBP14.04□□□□□ -0.16
RAB40B-203ENST00000570676 C1orf52Q8N6N3 182 aaKnown RBP14.04□□□□□ -0.16
RAB40B-203ENST00000570676 HORMAD2Q8N7B1 307 aa14.04□□□□□ -0.16
RAB40B-203ENST00000570676 ACOT4Q8N9L9 421 aa14.04□□□□□ -0.16
RAB40B-203ENST00000570676 FNDC5Q8NAU1 212 aa14.04□□□□□ -0.16
RAB40B-203ENST00000570676 SRFBP1Q8NEF9 429 aaKnown RBP14.04□□□□□ -0.16
RAB40B-203ENST00000570676 THAP3Q8WTV1 239 aaPredicted RBP14.04□□□□□ -0.16
RAB40B-203ENST00000570676 CHTF18Q8WVB6 975 aa14.04□□□□□ -0.16
RAB40B-203ENST00000570676 CCDC120Q96HB5 630 aa14.04□□□□□ -0.16
RAB40B-203ENST00000570676 MAPKAP1Q9BPZ7 522 aa14.04□□□□□ -0.16
RAB40B-203ENST00000570676 ROGDIQ9GZN7 287 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms