RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 C10orf111Q8N326 155 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 VPS37AQ8NEZ2 397 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 OR8J3Q8NGG0 315 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 PNPT1Q8TCS8 783 aaKnown RBP9.41□□□□□ -0.9
GDE1-205ENST00000569899 CNRIP1Q96F85 164 aaPredicted RBP9.41□□□□□ -0.9
GDE1-205ENST00000569899 GBP5Q96PP8 586 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 TRIM4Q9C037 500 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 SLC35C2Q9NQQ7 365 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 CUTCQ9NTM9 273 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 SIDT1Q9NXL6 827 aaKnown RBP9.41□□□□□ -0.9
GDE1-205ENST00000569899 DHCR7Q9UBM7 475 aaKnown RBP9.41□□□□□ -0.9
GDE1-205ENST00000569899 CD300AQ9UGN4 299 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 ACSL6Q9UKU0 697 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 POMPQ9Y244 141 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 L3MBTL1Q9Y468 752 aa9.41□□□□□ -0.9
GDE1-205ENST00000569899 TMEM184BQ9Y519 407 aaPredicted RBP9.41□□□□□ -0.9
GDE1-205ENST00000569899 FAM227AF5H4B4 570 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 CHST10O43529 356 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 LRP3O75074 770 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 DDX5P17844 614 aaKnown RBP9.4□□□□□ -0.9
GDE1-205ENST00000569899 ME2P23368 584 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 GSK3BP49841 420 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 CDK9P50750 372 aaKnown RBP9.4□□□□□ -0.9
GDE1-205ENST00000569899 ID2Q02363 134 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 LIPEQ05469 1076 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 EXOSC6Q5RKV6 272 aaKnown RBP9.4□□□□□ -0.9
GDE1-205ENST00000569899 ZNF621Q6ZSS3 439 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 TTLL10Q6ZVT0 673 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 IFNEQ86WN2 208 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 OR5AK3PQ8NH89 298 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 DNAJB8Q8NHS0 232 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 GOT1L1Q8NHS2 421 aaPredicted RBP9.4□□□□□ -0.9
GDE1-205ENST00000569899 SUN3Q8TAQ9 357 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 MMABQ96EY8 250 aaPredicted RBP9.4□□□□□ -0.9
GDE1-205ENST00000569899 ZBED6CLQ96FA7 236 aaPredicted RBP9.4□□□□□ -0.9
GDE1-205ENST00000569899 OR6C1Q96RD1 312 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 NPLQ9BXD5 320 aaPredicted RBP9.4□□□□□ -0.9
GDE1-205ENST00000569899 GLIPR2Q9H4G4 154 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 PIF1Q9H611 641 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 RPF2Q9H7B2 306 aaKnown RBP9.4□□□□□ -0.9
GDE1-205ENST00000569899 CXorf36Q9H7Y0 433 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 MS4A12Q9NXJ0 267 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 TAS2R7Q9NYW3 318 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 SUCOQ9UBS9 1254 aaKnown RBP9.4□□□□□ -0.9
GDE1-205ENST00000569899 ZNF282Q9UDV7 671 aaPredicted RBP9.4□□□□□ -0.9
GDE1-205ENST00000569899 NDOR1Q9UHB4 597 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 VPS4AQ9UN37 437 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 CLCA2Q9UQC9 943 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 ENTPD4Q9Y227 616 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 MAU2Q9Y6X3 613 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 SPACA6W5XKT8 324 aa9.4□□□□□ -0.9
GDE1-205ENST00000569899 CCDC88CQ9P219 2028 aa9.4□□□□□ -0.91
GDE1-205ENST00000569899 CYR61O00622 381 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 ZNF749O43361 778 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 LDB3O75112 727 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 TIAF1O95411 115 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 ZCCHC18P0CG32 403 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 HSD17B1P14061 328 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 FEN1P39748 380 aaKnown RBP9.39□□□□□ -0.91
GDE1-205ENST00000569899 AVPR1BP47901 424 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 NCBP2P52298 156 aaKnown RBP eCLIP9.39□□□□□ -0.91
GDE1-205ENST00000569899 MANFP55145 182 aaKnown RBP9.39□□□□□ -0.91
GDE1-205ENST00000569899 CLDN6P56747 220 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 EEFSECP57772 596 aaKnown RBP9.39□□□□□ -0.91
GDE1-205ENST00000569899 SKP1P63208 163 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 MS4A2Q01362 244 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 ACY1Q03154 408 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 ZFP36L1Q07352 338 aaKnown RBP9.39□□□□□ -0.91
GDE1-205ENST00000569899 LRRC74AQ0VAA2 488 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 TLDC1Q6P9B6 456 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 CYB5D1Q6P9G0 228 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 Q6ZS46 218 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 ERMP1Q7Z2K6 904 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 NET1Q7Z628 596 aaPredicted RBP9.39□□□□□ -0.91
GDE1-205ENST00000569899 OR4N5Q8IXE1 308 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.39□□□□□ -0.91
GDE1-205ENST00000569899 OR5P2Q8WZ92 322 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 WDR89Q96FK6 387 aaPredicted RBP9.39□□□□□ -0.91
GDE1-205ENST00000569899 PEX11GQ96HA9 241 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 AMDHD1Q96NU7 426 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 BBS4Q96RK4 519 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 KCTD14Q9BQ13 255 aaPredicted RBP9.39□□□□□ -0.91
GDE1-205ENST00000569899 SLC35A5Q9BS91 424 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 NDC1Q9BTX1 674 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 THUMPD3Q9BV44 507 aaKnown RBP9.39□□□□□ -0.91
GDE1-205ENST00000569899 PCDHAC1Q9H158 963 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 APMAPQ9HDC9 416 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 SIRT3Q9NTG7 399 aaPredicted RBP9.39□□□□□ -0.91
GDE1-205ENST00000569899 OCIAD1Q9NX40 245 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 TAS2R9Q9NYW1 312 aa9.39□□□□□ -0.91
GDE1-205ENST00000569899 RNF103-CHMP3A0A140T963 221 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 MYOCOSA0A1B0GUC4 107 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 EFCAB7A8K855 629 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 MYO1GB0I1T2 1018 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 CLIC1O00299 241 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 DSCR3O14972 297 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 FGF17O60258 216 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 DNAJA2O60884 412 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 ENTPD5O75356 428 aa9.38□□□□□ -0.91
GDE1-205ENST00000569899 CDC123O75794 336 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms