RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 PCM1Q15154 2024 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 FUOMA2VDF0 154 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 M0R082 166 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 CAPN5O15484 640 aaPredicted RBP8.3□□□□□ -1.08
LINC00558-201ENST00000569422 NDUFS4O43181 175 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 APOL3O95236 402 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 PCSK2P16519 638 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 CHMP24386 653 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 GRK5P34947 590 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 OPRD1P41143 372 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 XCR1P46094 333 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 SERPINB10P48595 397 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 NCBP2P52298 156 aaKnown RBP eCLIP8.3□□□□□ -1.08
LINC00558-201ENST00000569422 IFITM3Q01628 133 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 ACY1Q03154 408 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 RUNX1T1Q06455 604 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 DPTQ07507 201 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 RBBP4Q09028 425 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 IGSF11Q5DX21 431 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 ARMCX4Q5H9R4 360 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 COLEC12Q5KU26 742 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 FCRLBQ6BAA4 426 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 DNAJC22Q8N4W6 341 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 OR6C4Q8NGE1 309 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 SMPDL3AQ92484 453 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 MYDGFQ969H8 173 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 COL26A1Q96A83 441 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 OR5M11Q96RB7 305 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 BBS4Q96RK4 519 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 DPH7Q9BTV6 452 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 RSPO3Q9BXY4 272 aaPredicted RBP8.3□□□□□ -1.08
LINC00558-201ENST00000569422 MS4A8Q9BY19 250 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 KLHL25Q9H0H3 589 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 TMEM38AQ9H6F2 299 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 SEMA3GQ9NS98 782 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 PSORS1C1Q9UIG5 152 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 PCDHGB1Q9Y5G3 927 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 STON1Q9Y6Q2 735 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 ZNF106Q9H2Y7 1883 aaKnown RBP8.3□□□□□ -1.08
LINC00558-201ENST00000569422 TCF20Q9UGU0 1960 aaKnown RBP8.3□□□□□ -1.08
LINC00558-201ENST00000569422 ERI3O43414 337 aaKnown RBP8.3□□□□□ -1.08
LINC00558-201ENST00000569422 FRS3O43559 492 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 BUD31P41223 144 aaPredicted RBP8.3□□□□□ -1.08
LINC00558-201ENST00000569422 CDC42P60953 191 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 EEF1A2Q05639 463 aaKnown RBP8.3□□□□□ -1.08
LINC00558-201ENST00000569422 TARDBPQ13148 414 aaKnown RBP eCLIP8.3□□□□□ -1.08
LINC00558-201ENST00000569422 SGCGQ13326 291 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 MADCAM1Q13477 382 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 RUNX3Q13761 415 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 LASP1Q14847 261 aaKnown RBP8.3□□□□□ -1.08
LINC00558-201ENST00000569422 IRF4Q15306 451 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 SEC23BQ15437 767 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 GPR19Q15760 415 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 CST6Q15828 149 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 TMEM52BQ4KMG9 183 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 TMEM31Q5JXX7 168 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 NDUFAF5Q5TEU4 345 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 FAM46CQ5VWP2 391 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 METRNLQ641Q3 311 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 NUDT13Q86X67 352 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 LSMEM1Q8N8F7 131 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 GPR32P1Q8NGA4 272 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 OR4D11Q8NGI4 311 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 OR4C15Q8NGM1 316 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 WDR34Q96EX3 536 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 LINC00615Q96LM1 132 aaPredicted RBP8.3□□□□□ -1.08
LINC00558-201ENST00000569422 Q96MT0 163 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 TEFMQ96QE5 360 aaKnown RBP8.3□□□□□ -1.08
LINC00558-201ENST00000569422 PITX2Q99697 317 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 ZNF717Q9BY31 904 aaPredicted RBP8.3□□□□□ -1.08
LINC00558-201ENST00000569422 GABARAPL3Q9BY60 117 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 WNT5BQ9H1J7 359 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 OR51I1Q9H343 314 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 LHX9Q9NQ69 397 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 CA5BQ9Y2D0 317 aa8.3□□□□□ -1.08
LINC00558-201ENST00000569422 DENND4CQ5VZ89 1909 aa8.29□□□□□ -1.08
LINC00558-201ENST00000569422 TBC1D3DA0A087WVF3 549 aa8.29□□□□□ -1.08
LINC00558-201ENST00000569422 TBC1D3IA0A087WXS9 549 aa8.29□□□□□ -1.08
LINC00558-201ENST00000569422 TBC1D3EA0A087X179 549 aa8.29□□□□□ -1.08
LINC00558-201ENST00000569422 TBC1D3KA0A087X1G2 549 aa8.29□□□□□ -1.08
LINC00558-201ENST00000569422 TBC1D3FA6NER0 549 aaPredicted RBP8.29□□□□□ -1.08
LINC00558-201ENST00000569422 TBC1D3LB9A6J9 549 aa8.29□□□□□ -1.08
LINC00558-201ENST00000569422 PGRMC2O15173 223 aa8.29□□□□□ -1.08
LINC00558-201ENST00000569422 ADRA2AP08913 450 aa8.29□□□□□ -1.08
LINC00558-201ENST00000569422 TBC1D3HP0C7X1 549 aa8.29□□□□□ -1.08
LINC00558-201ENST00000569422 ZNF12P17014 697 aa8.29□□□□□ -1.08
LINC00558-201ENST00000569422 CD72P21854 359 aa8.29□□□□□ -1.08
LINC00558-201ENST00000569422 GDI1P31150 447 aa8.29□□□□□ -1.08
LINC00558-201ENST00000569422 TGFBR2P37173 567 aa8.29□□□□□ -1.08
LINC00558-201ENST00000569422 RNF144AP50876 292 aaPredicted RBP8.29□□□□□ -1.08
LINC00558-201ENST00000569422 FGL2Q14314 439 aa8.29□□□□□ -1.08
LINC00558-201ENST00000569422 MLF2Q15773 248 aaPredicted RBP8.29□□□□□ -1.08
LINC00558-201ENST00000569422 CRB2Q5IJ48 1285 aa8.29□□□□□ -1.08
LINC00558-201ENST00000569422 FAM209AQ5JX71 171 aa8.29□□□□□ -1.08
LINC00558-201ENST00000569422 TBC1D3GQ6DHY5 549 aa8.29□□□□□ -1.08
LINC00558-201ENST00000569422 TBC1D3CQ6IPX1 549 aa8.29□□□□□ -1.08
LINC00558-201ENST00000569422 UTS2BQ765I0 119 aa8.29□□□□□ -1.08
LINC00558-201ENST00000569422 KLHDC8AQ8IYD2 350 aa8.29□□□□□ -1.08
LINC00558-201ENST00000569422 TBC1D3Q8IZP1 549 aaPredicted RBP8.29□□□□□ -1.08
LINC00558-201ENST00000569422 CPA6Q8N4T0 437 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms