RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SRPXP78539 464 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 SPATA31D4Q6ZUB0 917 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 NUP54Q7Z3B4 507 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 PIWIL3Q7Z3Z3 882 aaKnown RBP6.81□□□□□ -1.32
CNOT1-216ENST00000569240 SLC51AQ86UW1 340 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 ZNF680Q8NEM1 530 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 C7orf34Q96L11 122 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 WDR18Q9BV38 432 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 GABARAPL1Q9H0R8 117 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 XYLT2Q9H1B5 865 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 BHLHE40O14503 412 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 HOXC11O43248 304 aaPredicted RBP6.81□□□□□ -1.32
CNOT1-216ENST00000569240 GPR137BO60478 399 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 ERAL1O75616 437 aaKnown RBP6.81□□□□□ -1.32
CNOT1-216ENST00000569240 NDUFV2P19404 249 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 ATXN1P54253 815 aaKnown RBP6.81□□□□□ -1.32
CNOT1-216ENST00000569240 ZNF616Q08AN1 781 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 UPP1Q16831 310 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 ZNF550Q7Z398 422 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 DDX1Q92499 740 aaKnown RBP6.81□□□□□ -1.32
CNOT1-216ENST00000569240 LRFN5Q96NI6 719 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 CD244Q9BZW8 370 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 WASF3Q9UPY6 502 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 RPS10-NUDT3A0A1W2PQS6 291 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 CTRB1P17538 263 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 POU3F3P20264 500 aaPredicted RBP6.81□□□□□ -1.32
CNOT1-216ENST00000569240 RPS10P46783 165 aaKnown RBP6.81□□□□□ -1.32
CNOT1-216ENST00000569240 RFX3P48380 749 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 OR12D2P58182 307 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 LAPTM4AQ15012 233 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 CTRB2Q6GPI1 263 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 TSSK4Q6SA08 328 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 IL34Q6ZMJ4 242 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 GOLGA7Q7Z5G4 137 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 OR9I1Q8NGQ6 314 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 STT3BQ8TCJ2 826 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 PHYHIPLQ96FC7 376 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 BORCS6Q96GS4 357 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 BCO2Q9BYV7 579 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 NOX3Q9HBY0 568 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 ASF1AQ9Y294 204 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 RNF11Q9Y3C5 154 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 RAI2Q9Y5P3 530 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 HEBP2Q9Y5Z4 205 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 ARHGAP33O14559 1287 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 CKBP12277 381 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 CCR9P51686 369 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 CBX2Q14781 532 aaPredicted RBP6.81□□□□□ -1.32
CNOT1-216ENST00000569240 PCBP2Q15366 365 aaKnown RBP eCLIP6.81□□□□□ -1.321e-7■■■■■ 29.9
CNOT1-216ENST00000569240 RAB11BQ15907 218 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 SEZ6Q53EL9 994 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 PDZD3Q86UT5 571 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 ARHGAP12Q8IWW6 846 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 CCDC54Q8NEL0 328 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 OR6C4Q8NGE1 309 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 OR6T1Q8NGN1 323 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 OTUB2Q96DC9 234 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 DUSP21Q9H596 190 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 DDX4Q9NQI0 724 aaKnown RBP6.81□□□□□ -1.32
CNOT1-216ENST00000569240 ZCCHC3Q9NUD5 404 aaKnown RBP6.81□□□□□ -1.32
CNOT1-216ENST00000569240 ZNF225Q9UK10 706 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 NENFQ9UMX5 172 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 STRAPQ9Y3F4 350 aaKnown RBP6.81□□□□□ -1.32
CNOT1-216ENST00000569240 FBXO7Q9Y3I1 522 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 PCDHB14Q9Y5E9 798 aa6.81□□□□□ -1.32
CNOT1-216ENST00000569240 OR2A25A4D2G3 310 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 YDJCA8MPS7 323 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 C1QTNF3-AMACRE9PGA6 284 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 G3V2L1 256 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 SLC33A1O00400 549 aaPredicted RBP6.8□□□□□ -1.32
CNOT1-216ENST00000569240 SRPX2O60687 465 aaPredicted RBP6.8□□□□□ -1.32
CNOT1-216ENST00000569240 S1PR1P21453 382 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 UNC50Q53HI1 259 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 NOL9Q5SY16 702 aaKnown RBP6.8□□□□□ -1.32
CNOT1-216ENST00000569240 CDHR3Q6ZTQ4 885 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 C7orf61Q8IZ16 206 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 KLHDC1Q8N7A1 406 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 NLGN2Q8NFZ4 835 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 OR4Q3Q8NH05 313 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 TMEM74Q96NL1 305 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 SORT1Q99523 831 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 ZDHHC3Q9NYG2 299 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 KIAA1522Q9P206 1035 aaPredicted RBP6.8□□□□□ -1.32
CNOT1-216ENST00000569240 MYOCOSA0A1B0GUC4 107 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 C7orf72A4D263 438 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 UNC119BA6NIH7 251 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 J3QLW9 94 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 INSRRP14616 1297 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 ZNF19P17023 458 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 GPX3P22352 226 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 NFYBP25208 207 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 SNCAP37840 140 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 OR1G1P47890 313 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 NRG3P56975 720 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 DAOAP59103 153 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 INCA1Q0VD86 236 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 AANATQ16613 207 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 PLEKHS1Q5SXH7 462 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 OR4F3Q6IEY1 312 aa6.8□□□□□ -1.32
CNOT1-216ENST00000569240 TRAPPC5Q8IUR0 188 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms