RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 ACTR8Q9H981 624 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 NMRAL1Q9HBL8 299 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 QPCTLQ9NXS2 382 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 ASB4Q9Y574 426 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 ANGPTL3Q9Y5C1 460 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 NSD1Q96L73 2696 aaPredicted RBP14.23□□□□□ -0.13
NME3-211ENST00000568561 A0A0A6YYD5 115 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 FAM221AA4D161 298 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 ACSL3O95573 720 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 LTA4HP09960 611 aaKnown RBP14.22□□□□□ -0.13
NME3-211ENST00000568561 CT62P0C5K7 136 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 MTHFD2P13995 350 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 DNASE1P24855 282 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 CEACAM8P31997 349 aaPredicted RBP14.22□□□□□ -0.13
NME3-211ENST00000568561 BSGP35613 385 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 PIK3CBP42338 1070 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 PAFAH1B1P43034 410 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 ZNF136P52737 540 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 DGKQP52824 942 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 ILF2Q12905 390 aaKnown RBP14.22□□□□□ -0.13
NME3-211ENST00000568561 CBLBQ13191 982 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 RPS6KA2Q15349 733 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 CPSF6Q16630 551 aaKnown RBP eCLIP14.22□□□□□ -0.13
NME3-211ENST00000568561 TMEM198Q66K66 360 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 MRM1Q6IN84 353 aaKnown RBP14.22□□□□□ -0.13
NME3-211ENST00000568561 POMZP3Q6PJE2 187 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 CCDC25Q86WR0 208 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 DND1Q8IYX4 353 aaKnown RBP14.22□□□□□ -0.13
NME3-211ENST00000568561 TAGAPQ8N103 731 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 ZNF441Q8N8Z8 693 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 GOT1L1Q8NHS2 421 aaPredicted RBP14.22□□□□□ -0.13
NME3-211ENST00000568561 RNASE6Q93091 150 aaKnown RBP14.22□□□□□ -0.13
NME3-211ENST00000568561 RILPQ96NA2 401 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 TIMP4Q99727 224 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 PELOQ9BRX2 385 aaKnown RBP14.22□□□□□ -0.13
NME3-211ENST00000568561 LYARQ9NX58 379 aaKnown RBP14.22□□□□□ -0.13
NME3-211ENST00000568561 TEX10Q9NXF1 929 aaPredicted RBP14.22□□□□□ -0.13
NME3-211ENST00000568561 GRHL1Q9NZI5 618 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 CAMK2AQ9UQM7 478 aa14.22□□□□□ -0.13
NME3-211ENST00000568561 C2orf92A0A1B0GVN3 265 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 PGRMC2O15173 223 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 RAD51CO43502 376 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 EPPINO95925 133 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 FAM58BPP0C7Q3 252 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 MASP1P48740 699 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 NEK2P51955 445 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 PCDH1Q08174 1060 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 TBL3Q12788 808 aaKnown RBP14.21□□□□□ -0.13
NME3-211ENST00000568561 TOMM20Q15388 145 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 NNATQ16517 81 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 PFKFB4Q16877 469 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 EIPR1Q53HC9 387 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 GRTP1Q5TC63 336 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 FNDC7Q5VTL7 733 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 CYP20A1Q6UW02 462 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 LACC1Q8IV20 430 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 CENPLQ8N0S6 344 aaPredicted RBP14.21□□□□□ -0.13
NME3-211ENST00000568561 MMP21Q8N119 569 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 FAM222BQ8WU58 562 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 MRRFQ96E11 262 aaKnown RBP14.21□□□□□ -0.13
NME3-211ENST00000568561 GNRHR2Q96P88 292 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 ERP44Q9BS26 406 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 WHRNQ9P202 907 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 ADGRE2Q9UHX3 823 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 PCDHGB3Q9Y5G1 929 aa14.21□□□□□ -0.13
NME3-211ENST00000568561 ABCA2Q9BZC7 2435 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 OR6C76A6NM76 312 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 EEF1E1-BLOC1S5C9J1V9 151 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 TP53I11O14683 189 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 GNB5O14775 395 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 EIF3HO15372 352 aaKnown RBP eCLIP14.2□□□□□ -0.14
NME3-211ENST00000568561 EEF1E1O43324 174 aaKnown RBP14.2□□□□□ -0.14
NME3-211ENST00000568561 SIX3O95343 332 aaPredicted RBP14.2□□□□□ -0.14
NME3-211ENST00000568561 GFAPP14136 432 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 CDK9P50750 372 aaKnown RBP14.2□□□□□ -0.14
NME3-211ENST00000568561 BIKQ13323 160 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 SETDB1Q15047 1291 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 WIPI1Q5MNZ9 446 aaPredicted RBP14.2□□□□□ -0.14
NME3-211ENST00000568561 FBXW10Q5XX13 1052 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 HLA-DQA1Q5Y7H0 255 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 DESI1Q6ICB0 168 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 OR52E8Q6IFG1 317 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 PAMR1Q6UXH9 720 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 NUDT13Q86X67 352 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 GALNT12Q8IXK2 581 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 C7orf57Q8NEG2 295 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 LINC01560Q8TB33 94 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 SPPL2AQ8TCT8 520 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 FBF1Q8TES7 1133 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 TRIB1Q96RU8 372 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 UGT2B28Q9BY64 529 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 PRDM14Q9GZV8 571 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 EPB41L4BQ9H329 900 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 UBQLN3Q9H347 655 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 DDX31Q9H8H2 851 aaKnown RBP14.2□□□□□ -0.14
NME3-211ENST00000568561 WDR41Q9HAD4 459 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 CXorf21Q9HAI6 301 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 MTRF1LQ9UGC7 380 aaKnown RBP14.2□□□□□ -0.14
NME3-211ENST00000568561 DTX4Q9Y2E6 619 aa14.2□□□□□ -0.14
NME3-211ENST00000568561 C15orf41Q9Y2V0 281 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms