RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 GPX3P22352 226 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 ARFIP2P53365 341 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 PHC1P78364 1004 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 FAM111BQ6SJ93 734 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 GALNT12Q8IXK2 581 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 KBTBD2Q8IY47 623 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 GALNT16Q8N428 558 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 CLEC1AQ8NC01 280 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 ADCY4Q8NFM4 1077 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 OR9I1Q8NGQ6 314 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 OR1N1Q8NGS0 311 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 ZNF675Q8TD23 568 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 RIT1Q92963 219 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 SENP5Q96HI0 755 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-222ENST00000568034 FBXL20Q96IG2 436 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 NUDT9Q9BW91 350 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 OR8D2Q9GZM6 311 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 ZIM2Q9NZV7 527 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 ZNF639Q9UID6 485 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 ERVK-19Q9WJR5 959 aa16.76■□□□□ 0.27
COMMD4-222ENST00000568034 COPG1Q9Y678 874 aaKnown RBP16.76■□□□□ 0.27
COMMD4-222ENST00000568034 PRKNO60260 465 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-222ENST00000568034 SCN2BO60939 215 aa16.75■□□□□ 0.27
COMMD4-222ENST00000568034 NTSP30990 170 aa16.75■□□□□ 0.27
COMMD4-222ENST00000568034 ATP4BP51164 291 aa16.75■□□□□ 0.27
COMMD4-222ENST00000568034 CCL11P51671 97 aa16.75■□□□□ 0.27
COMMD4-222ENST00000568034 PGDP52209 483 aa16.75■□□□□ 0.27
COMMD4-222ENST00000568034 NCBP2P52298 156 aaKnown RBP eCLIP16.75■□□□□ 0.272e-6■■□□□ 13
COMMD4-222ENST00000568034 CLNS1AP54105 237 aaKnown RBP16.75■□□□□ 0.27
COMMD4-222ENST00000568034 FUT7Q11130 342 aa16.75■□□□□ 0.27
COMMD4-222ENST00000568034 MAP4K2Q12851 820 aa16.75■□□□□ 0.27
COMMD4-222ENST00000568034 DUSP8Q13202 625 aa16.75■□□□□ 0.27
COMMD4-222ENST00000568034 ZNF267Q14586 743 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-222ENST00000568034 SPANXN4Q5MJ08 99 aa16.75■□□□□ 0.27
COMMD4-222ENST00000568034 CPTPQ5TA50 214 aa16.75■□□□□ 0.27
COMMD4-222ENST00000568034 PAOXQ6QHF9 649 aa16.75■□□□□ 0.27
COMMD4-222ENST00000568034 ZNF551Q7Z340 670 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-222ENST00000568034 SIMC1Q8NDZ2 872 aa16.75■□□□□ 0.27
COMMD4-222ENST00000568034 FDCSPQ8NFU4 85 aa16.75■□□□□ 0.27
COMMD4-222ENST00000568034 OR8J2Q8NGG1 315 aa16.75■□□□□ 0.27
COMMD4-222ENST00000568034 VMP1Q96GC9 406 aa16.75■□□□□ 0.27
COMMD4-222ENST00000568034 THOC3Q96J01 351 aaKnown RBP16.75■□□□□ 0.27
COMMD4-222ENST00000568034 BBS4Q96RK4 519 aa16.75■□□□□ 0.27
COMMD4-222ENST00000568034 NPAS2Q99743 824 aa16.75■□□□□ 0.27
COMMD4-222ENST00000568034 CNPPD1Q9BV87 410 aa16.75■□□□□ 0.27
COMMD4-222ENST00000568034 BHLHE41Q9C0J9 482 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-222ENST00000568034 ACSS1Q9NUB1 689 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-222ENST00000568034 MAPRE3Q9UPY8 281 aa16.75■□□□□ 0.27
COMMD4-222ENST00000568034 CACNA1BQ00975 2339 aa16.75■□□□□ 0.27
COMMD4-222ENST00000568034 SHOX2O60902 331 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-222ENST00000568034 CBX7O95931 251 aa16.74■□□□□ 0.27
COMMD4-222ENST00000568034 ICAM2P13598 275 aa16.74■□□□□ 0.27
COMMD4-222ENST00000568034 CD1EP15812 388 aa16.74■□□□□ 0.27
COMMD4-222ENST00000568034 EFNA1P20827 205 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-222ENST00000568034 ITGA3P26006 1051 aa16.74■□□□□ 0.27
COMMD4-222ENST00000568034 SSTR4P31391 388 aa16.74■□□□□ 0.27
COMMD4-222ENST00000568034 MPIP34949 423 aa16.74■□□□□ 0.27
COMMD4-222ENST00000568034 SOX11P35716 441 aa16.74■□□□□ 0.27
COMMD4-222ENST00000568034 MRPS35P82673 323 aaKnown RBP16.74■□□□□ 0.27
COMMD4-222ENST00000568034 FHL5Q5TD97 284 aa16.74■□□□□ 0.27
COMMD4-222ENST00000568034 OR4F3Q6IEY1 312 aa16.74■□□□□ 0.27
COMMD4-222ENST00000568034 H3F3CQ6NXT2 135 aa16.74■□□□□ 0.27
COMMD4-222ENST00000568034 MIER2Q8N344 545 aa16.74■□□□□ 0.27
COMMD4-222ENST00000568034 VWA5B2Q8N398 1253 aa16.74■□□□□ 0.27
COMMD4-222ENST00000568034 ZNF615Q8N8J6 731 aa16.74■□□□□ 0.27
COMMD4-222ENST00000568034 BRIX1Q8TDN6 353 aaKnown RBP16.74■□□□□ 0.27
COMMD4-222ENST00000568034 KAT2AQ92830 837 aa16.74■□□□□ 0.27
COMMD4-222ENST00000568034 RILPQ96NA2 401 aa16.74■□□□□ 0.27
COMMD4-222ENST00000568034 DUSP26Q9BV47 211 aa16.74■□□□□ 0.27
COMMD4-222ENST00000568034 LHPPQ9H008 270 aa16.74■□□□□ 0.27
COMMD4-222ENST00000568034 TRBV11-1A0A0K0K1C0 115 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 TMEM200CA6NKL6 621 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 A6NL46 340 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 SNX3O60493 162 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 SLC22A3O75751 556 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 DDX5P17844 614 aaKnown RBP16.73■□□□□ 0.27
COMMD4-222ENST00000568034 CDK9P50750 372 aaKnown RBP16.73■□□□□ 0.27
COMMD4-222ENST00000568034 POLE2P56282 527 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 SLC37A1P57057 533 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 SRSF11Q05519 484 aaKnown RBP16.73■□□□□ 0.27
COMMD4-222ENST00000568034 RAPSNQ13702 412 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 SQLEQ14534 574 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 MYBPC3Q14896 1274 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 MLC1Q15049 377 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 RPS6KA2Q15349 733 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 DPY19L1Q2PZI1 675 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 FAM174BQ3ZCQ3 159 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 TRMT12Q53H54 448 aaKnown RBP16.73■□□□□ 0.27
COMMD4-222ENST00000568034 METTL21CQ5VZV1 264 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 JMJD6Q6NYC1 403 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-222ENST00000568034 PCSK4Q6UW60 755 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 SPATA21Q7Z572 469 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 FUNDC1Q8IVP5 155 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 C9orf40Q8IXQ3 194 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 GLB1L3Q8NCI6 653 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-222ENST00000568034 OR7G2Q8NG99 324 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 ZBED6CLQ96FA7 236 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-222ENST00000568034 ART5Q96L15 291 aa16.73■□□□□ 0.27
COMMD4-222ENST00000568034 PRPF18Q99633 342 aaKnown RBP16.73■□□□□ 0.27
COMMD4-222ENST00000568034 ELAC2Q9BQ52 826 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms