RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 IFI6P09912 130 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 ETFAP13804 333 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 GNSP15586 552 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 ZNF23P17027 643 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 GPC1P35052 558 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 CCT3P49368 545 aaKnown RBP13.77□□□□□ -0.21
COMMD4-221ENST00000567935 NCBP2P52298 156 aaKnown RBP eCLIP13.77□□□□□ -0.21
COMMD4-221ENST00000567935 EEF1A2Q05639 463 aaKnown RBP13.77□□□□□ -0.21
COMMD4-221ENST00000567935 HSPB3Q12988 150 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 SPIDRQ14159 915 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 GNA13Q14344 377 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 PDK3Q15120 406 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 CRB2Q5IJ48 1285 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 TMEM214Q6NUQ4 689 aaKnown RBP13.77□□□□□ -0.21
COMMD4-221ENST00000567935 HIPK1Q86Z02 1210 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 ZDHHC13Q8IUH4 622 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 ZDHHC21Q8IVQ6 265 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 CSNK1A1LQ8N752 337 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 FAM86B1Q8N7N1 296 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 KNL1Q8NG31 2342 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 FAM110BQ8TC76 370 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 TCTN2Q96GX1 697 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 SLC29A1Q99808 456 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 GLIPR2Q9H4G4 154 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 CLK4Q9HAZ1 481 aaKnown RBP13.77□□□□□ -0.21
COMMD4-221ENST00000567935 EVA1BQ9NVM1 165 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 USE1Q9NZ43 259 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 SUSD2Q9UGT4 822 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 FBXW2Q9UKT8 454 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 MAP4K5Q9Y4K4 846 aa13.77□□□□□ -0.21
COMMD4-221ENST00000567935 UPK1AO00322 258 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 SOCS2O14508 198 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 P2RX6O15547 441 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 SLITRK5O94991 958 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 FABP3P05413 133 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 FHP07954 510 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 NUDT7P0C024 238 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 TYRP1P17643 537 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 CPN2P22792 545 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 LSSP48449 732 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 KHKP50053 298 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 CDK9P50750 372 aaKnown RBP13.76□□□□□ -0.21
COMMD4-221ENST00000567935 CHN2P52757 468 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 PCBP3P57721 371 aaKnown RBP13.76□□□□□ -0.21
COMMD4-221ENST00000567935 SELENOWP63302 87 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 PRR5P85299 388 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 DAG1Q14118 895 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 GK3PQ14409 553 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 NKG7Q16617 165 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 NRF1Q16656 503 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 CYBRD1Q53TN4 286 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 COX20Q5RI15 118 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 REEP3Q6NUK4 255 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 CEACAM20Q6UY09 585 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 C6orf120Q7Z4R8 191 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 APLFQ8IW19 511 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-221ENST00000567935 OR5K1Q8NHB7 308 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 MIPOL1Q8TD10 442 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 TMBIM1Q969X1 311 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 NRBF2Q96F24 287 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 TRAPPC9Q96Q05 1148 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 MAPKAP1Q9BPZ7 522 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 MACROD1Q9BQ69 325 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 DOHHQ9BU89 302 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 ANKRD60Q9BZ19 345 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 SYNPO2LQ9H987 977 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 NTN4Q9HB63 628 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 C3orf14Q9HBI5 128 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 SMPD3Q9NY59 655 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-221ENST00000567935 KCMF1Q9P0J7 381 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 IFT80Q9P2H3 777 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-221ENST00000567935 ACSL6Q9UKU0 697 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 DAPP1Q9UN19 280 aa13.76□□□□□ -0.21
COMMD4-221ENST00000567935 BLACEA4D250 179 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 C7orf72A4D263 438 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 TLCD2A6NGC4 264 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 RHPN2P1A8MT19 583 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 C5orf58C9J3I9 102 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 G3V2T6 193 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 RRP8O43159 456 aaKnown RBP13.75□□□□□ -0.21
COMMD4-221ENST00000567935 SLC28A2O43868 658 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 ERAL1O75616 437 aaKnown RBP13.75□□□□□ -0.21
COMMD4-221ENST00000567935 STATHP02808 62 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 LYNP07948 512 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 PVRP15151 417 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 ITGA2P17301 1181 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 PPP2R1BP30154 601 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 GPR3P46089 330 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 ARRB1P49407 418 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-221ENST00000567935 CSNK1EP49674 416 aaKnown RBP13.75□□□□□ -0.21
COMMD4-221ENST00000567935 ALDH3A2P51648 485 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 ARHGDIAP52565 204 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 GTF2A1P52655 376 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-221ENST00000567935 LIM2P55344 173 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 CXADRP78310 365 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 NDUFA9Q16795 377 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 RFX4Q33E94 735 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 CCDC157Q569K6 752 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 NHSL2Q5HYW2 709 aa13.75□□□□□ -0.21
COMMD4-221ENST00000567935 C6orf132Q5T0Z8 1188 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms