RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 MPEG1Q2M385 716 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 SPRED3Q2MJR0 410 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 SFT2D3Q587I9 215 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 CPZQ66K79 652 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 REP15Q6BDI9 236 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 PAPD4Q6PIY7 484 aaKnown RBP7.28□□□□□ -1.24
CDH1-208ENST00000565810 SLC2A7Q6PXP3 512 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 TMEM107Q6UX40 140 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 LRRC69Q6ZNQ3 347 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 LANCL3Q6ZV70 420 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 NDUFAF7Q7L592 441 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 ZNF551Q7Z340 670 aaPredicted RBP7.28□□□□□ -1.24
CDH1-208ENST00000565810 SZRD1Q7Z422 152 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 VASH2Q86V25 355 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 CLECL1Q8IZS7 167 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 VWA5B2Q8N398 1253 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 DPP10Q8N608 796 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 MORN4Q8NDC4 146 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 ADCY4Q8NFM4 1077 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 OR7G1Q8NGA0 311 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 SUN3Q8TAQ9 357 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 ZNF675Q8TD23 568 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 GTF2H4Q92759 462 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 C8orf44Q96CB5 159 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 ELP4Q96EB1 424 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 MAGED4Q96JG8 741 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 FER1L6-AS2Q96M78 137 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 CNPPD1Q9BV87 410 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 CXorf21Q9HAI6 301 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 SLAMF7Q9NQ25 335 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 DDX18Q9NVP1 670 aaKnown RBP7.28□□□□□ -1.24
CDH1-208ENST00000565810 NDE1Q9NXR1 346 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 PTGFRNQ9P2B2 879 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 COPS7AQ9UBW8 275 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 PRODH2Q9UF12 536 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 IL17BQ9UHF5 180 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 CFL2Q9Y281 166 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 MAN2B2Q9Y2E5 1009 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 CLDN16Q9Y5I7 305 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 MRPS18BQ9Y676 258 aaKnown RBP7.28□□□□□ -1.24
CDH1-208ENST00000565810 COL27A1Q8IZC6 1860 aaPredicted RBP7.28□□□□□ -1.24
CDH1-208ENST00000565810 ASPMQ8IZT6 3477 aa7.28□□□□□ -1.24
CDH1-208ENST00000565810 MDC1Q14676 2089 aaKnown RBP7.28□□□□□ -1.24
CDH1-208ENST00000565810 SPTBP11277 2137 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 A0A087WV62 115 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 A0A096LPI6 279 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 NSG1A0A0A6YYJ2 146 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 IGHV3-20A0A0C4DH32 117 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 A0A1W2PS29 197 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 CDC14CA4D256 554 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 SAGE2PA6NJ88 616 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 ZNF891A8MT65 544 aaPredicted RBP7.27□□□□□ -1.25
CDH1-208ENST00000565810 EVPLLA8MZ36 301 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 HAX1O00165 279 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 EMC8O43402 210 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 TLX3O43711 291 aaPredicted RBP7.27□□□□□ -1.25
CDH1-208ENST00000565810 PLOD3O60568 738 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 SEC24DO94855 1032 aaPredicted RBP7.27□□□□□ -1.25
CDH1-208ENST00000565810 UBOX5O94941 541 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 CBX6O95503 412 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 KRT75O95678 551 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 GSNP06396 782 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 KRT16P08779 473 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 IFI6P09912 130 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 ZCCHC18P0CG32 403 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 UQCRC2P22695 453 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 PPIBP23284 216 aaKnown RBP7.27□□□□□ -1.25
CDH1-208ENST00000565810 CHI3L1P36222 383 aaPredicted RBP7.27□□□□□ -1.25
CDH1-208ENST00000565810 MC3RP41968 323 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 CCT3P49368 545 aaKnown RBP7.27□□□□□ -1.25
CDH1-208ENST00000565810 RASSF2P50749 326 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 CDK9P50750 372 aaKnown RBP7.27□□□□□ -1.25
CDH1-208ENST00000565810 PRKAG1P54619 331 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 AP2B1P63010 937 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 DUSP2Q05923 314 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 TP53BP2Q13625 1128 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 LTB4RQ15722 352 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 EXT1Q16394 746 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 PRICKLE4Q2TBC4 344 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 TRMT5Q32P41 509 aaKnown RBP7.27□□□□□ -1.25
CDH1-208ENST00000565810 ZNF628Q5EBL2 1059 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 PAGE3Q5JUK9 113 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 FAM69BQ5VUD6 431 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 BROXQ5VW32 411 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 FAM111BQ6SJ93 734 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 KIRREL2Q6UWL6 708 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 ANGPTL8Q6UXH0 198 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 TMEM64Q6YI46 380 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 CCDC121Q6ZUS5 278 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 DHDDSQ86SQ9 333 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 NUP43Q8NFH3 380 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 OR56A1Q8NGH5 318 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 OR1N1Q8NGS0 311 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 GOT1L1Q8NHS2 421 aaPredicted RBP7.27□□□□□ -1.25
CDH1-208ENST00000565810 PSMA8Q8TAA3 256 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 SFXN5Q8TD22 340 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 PTPMT1Q8WUK0 201 aaPredicted RBP7.27□□□□□ -1.25
CDH1-208ENST00000565810 THAP4Q8WY91 577 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 KAT2AQ92830 837 aa7.27□□□□□ -1.25
CDH1-208ENST00000565810 GATA6Q92908 595 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms