RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 AKAP10O43572 662 aa24.22■■□□□ 1.47
NME3-208ENST00000565379 OR10H2O60403 315 aa24.22■■□□□ 1.47
NME3-208ENST00000565379 KLHL41O60662 606 aa24.22■■□□□ 1.47
NME3-208ENST00000565379 LRATO95237 230 aa24.22■■□□□ 1.47
NME3-208ENST00000565379 COX6A1P12074 109 aa24.22■■□□□ 1.47
NME3-208ENST00000565379 ICAM2P13598 275 aa24.22■■□□□ 1.47
NME3-208ENST00000565379 CPMP14384 443 aa24.22■■□□□ 1.47
NME3-208ENST00000565379 ATP4BP51164 291 aa24.22■■□□□ 1.47
NME3-208ENST00000565379 PGDP52209 483 aa24.22■■□□□ 1.47
NME3-208ENST00000565379 SEC24CP53992 1094 aa24.22■■□□□ 1.47
NME3-208ENST00000565379 CAMKMTQ7Z624 323 aa24.22■■□□□ 1.47
NME3-208ENST00000565379 RIMKLAQ8IXN7 391 aa24.22■■□□□ 1.47
NME3-208ENST00000565379 MMP21Q8N119 569 aa24.22■■□□□ 1.47
NME3-208ENST00000565379 GLB1L3Q8NCI6 653 aaPredicted RBP24.22■■□□□ 1.47
NME3-208ENST00000565379 OR14A16Q8NHC5 309 aa24.22■■□□□ 1.47
NME3-208ENST00000565379 UCN3Q969E3 161 aa24.22■■□□□ 1.47
NME3-208ENST00000565379 GFM2Q969S9 779 aaKnown RBP24.22■■□□□ 1.47
NME3-208ENST00000565379 EXOSC8Q96B26 276 aaKnown RBP24.22■■□□□ 1.47
NME3-208ENST00000565379 ZBTB18Q99592 522 aa24.22■■□□□ 1.47
NME3-208ENST00000565379 SDR39U1Q9NRG7 319 aaPredicted RBP24.22■■□□□ 1.47
NME3-208ENST00000565379 ZIM2Q9NZV7 527 aa24.22■■□□□ 1.47
NME3-208ENST00000565379 GABRR3A8MPY1 467 aa24.21■■□□□ 1.47
NME3-208ENST00000565379 CEACAM4O75871 244 aa24.21■■□□□ 1.47
NME3-208ENST00000565379 NTSP30990 170 aa24.21■■□□□ 1.47
NME3-208ENST00000565379 MPIP34949 423 aa24.21■■□□□ 1.47
NME3-208ENST00000565379 ID2Q02363 134 aa24.21■■□□□ 1.47
NME3-208ENST00000565379 SRSF11Q05519 484 aaKnown RBP24.21■■□□□ 1.47
NME3-208ENST00000565379 PCOLCEQ15113 449 aa24.21■■□□□ 1.47
NME3-208ENST00000565379 EXT1Q16394 746 aa24.21■■□□□ 1.47
NME3-208ENST00000565379 CPTPQ5TA50 214 aa24.21■■□□□ 1.47
NME3-208ENST00000565379 TMEM198Q66K66 360 aa24.21■■□□□ 1.47
NME3-208ENST00000565379 MIER2Q8N344 545 aa24.21■■□□□ 1.47
NME3-208ENST00000565379 LRRC25Q8N386 305 aaPredicted RBP24.21■■□□□ 1.47
NME3-208ENST00000565379 TESCQ96BS2 214 aa24.21■■□□□ 1.47
NME3-208ENST00000565379 C8orf44Q96CB5 159 aa24.21■■□□□ 1.47
NME3-208ENST00000565379 ZNF681Q96N22 645 aa24.21■■□□□ 1.47
NME3-208ENST00000565379 RABEP2Q9H5N1 569 aa24.21■■□□□ 1.47
NME3-208ENST00000565379 PNO1Q9NRX1 252 aaKnown RBP24.21■■□□□ 1.47
NME3-208ENST00000565379 SH3BP4Q9P0V3 963 aa24.21■■□□□ 1.47
NME3-208ENST00000565379 LUZP4Q9P127 313 aa24.21■■□□□ 1.47
NME3-208ENST00000565379 C5AR2Q9P296 337 aa24.21■■□□□ 1.47
NME3-208ENST00000565379 FBXL4Q9UKA2 621 aa24.21■■□□□ 1.47
NME3-208ENST00000565379 CLCA3PQ9Y6N3 262 aa24.21■■□□□ 1.47
NME3-208ENST00000565379 USP9XQ93008 2570 aaPredicted RBP24.2■■□□□ 1.47
NME3-208ENST00000565379 SAGE2PA6NJ88 616 aa24.2■■□□□ 1.46
NME3-208ENST00000565379 WASHC1A8K0Z3 465 aa24.2■■□□□ 1.46
NME3-208ENST00000565379 ANKRD28O15084 1053 aa24.2■■□□□ 1.46
NME3-208ENST00000565379 SHOX2O60902 331 aaPredicted RBP24.2■■□□□ 1.46
NME3-208ENST00000565379 SLITRK5O94991 958 aa24.2■■□□□ 1.46
NME3-208ENST00000565379 ATP1B1P05026 303 aa24.2■■□□□ 1.46
NME3-208ENST00000565379 TNNI3P19429 210 aa24.2■■□□□ 1.46
NME3-208ENST00000565379 DRD4P21917 467 aa24.2■■□□□ 1.46
NME3-208ENST00000565379 EEF1A2Q05639 463 aaKnown RBP24.2■■□□□ 1.46
NME3-208ENST00000565379 C6orf163Q5TEZ5 329 aa24.2■■□□□ 1.46
NME3-208ENST00000565379 PAPD4Q6PIY7 484 aaKnown RBP24.2■■□□□ 1.46
NME3-208ENST00000565379 SPATA21Q7Z572 469 aa24.2■■□□□ 1.46
NME3-208ENST00000565379 COQ8BQ96D53 544 aa24.2■■□□□ 1.46
NME3-208ENST00000565379 CNRIP1Q96F85 164 aaPredicted RBP24.2■■□□□ 1.46
NME3-208ENST00000565379 ART5Q96L15 291 aa24.2■■□□□ 1.46
NME3-208ENST00000565379 BBS4Q96RK4 519 aa24.2■■□□□ 1.46
NME3-208ENST00000565379 PPIEQ9UNP9 301 aaKnown RBP24.2■■□□□ 1.46
NME3-208ENST00000565379 PCDHGA9Q9Y5G4 932 aaKnown RBP24.2■■□□□ 1.46
NME3-208ENST00000565379 CLEC18AA5D8T8 446 aa24.19■■□□□ 1.46
NME3-208ENST00000565379 MYO1GB0I1T2 1018 aa24.19■■□□□ 1.46
NME3-208ENST00000565379 SLC22A3O75751 556 aa24.19■■□□□ 1.46
NME3-208ENST00000565379 SPRED3Q2MJR0 410 aa24.19■■□□□ 1.46
NME3-208ENST00000565379 CLEC18BQ6UXF7 455 aa24.19■■□□□ 1.46
NME3-208ENST00000565379 RIPOR1Q6ZS17 1223 aa24.19■■□□□ 1.46
NME3-208ENST00000565379 CLEC18CQ8NCF0 446 aa24.19■■□□□ 1.46
NME3-208ENST00000565379 MORN4Q8NDC4 146 aa24.19■■□□□ 1.46
NME3-208ENST00000565379 ZFP28Q8NHY6 868 aa24.19■■□□□ 1.46
NME3-208ENST00000565379 ZBED6CLQ96FA7 236 aaPredicted RBP24.19■■□□□ 1.46
NME3-208ENST00000565379 IMMP1LQ96LU5 166 aa24.19■■□□□ 1.46
NME3-208ENST00000565379 WDR77Q9BQA1 342 aaPredicted RBP24.19■■□□□ 1.46
NME3-208ENST00000565379 MESP1Q9BRJ9 268 aa24.19■■□□□ 1.46
NME3-208ENST00000565379 MFRPQ9BY79 579 aa24.19■■□□□ 1.46
NME3-208ENST00000565379 BHLHE41Q9C0J9 482 aaPredicted RBP24.19■■□□□ 1.46
NME3-208ENST00000565379 ATP13A2Q9NQ11 1180 aa24.19■■□□□ 1.46
NME3-208ENST00000565379 ACSS1Q9NUB1 689 aaPredicted RBP24.19■■□□□ 1.46
NME3-208ENST00000565379 PDPK1O15530 556 aa24.18■■□□□ 1.46
NME3-208ENST00000565379 FEN1P39748 380 aaKnown RBP24.18■■□□□ 1.46
NME3-208ENST00000565379 AIMP2Q13155 320 aaKnown RBP24.18■■□□□ 1.46
NME3-208ENST00000565379 SQLEQ14534 574 aa24.18■■□□□ 1.46
NME3-208ENST00000565379 DCAF10Q5QP82 559 aa24.18■■□□□ 1.46
NME3-208ENST00000565379 PLAG1Q6DJT9 500 aa24.18■■□□□ 1.46
NME3-208ENST00000565379 KRTCAP2Q8N6L1 136 aa24.18■■□□□ 1.46
NME3-208ENST00000565379 CLEC1AQ8NC01 280 aa24.18■■□□□ 1.46
NME3-208ENST00000565379 OR8J2Q8NGG1 315 aa24.18■■□□□ 1.46
NME3-208ENST00000565379 M1APQ8TC57 530 aa24.18■■□□□ 1.46
NME3-208ENST00000565379 C10orf82Q8WW14 230 aa24.18■■□□□ 1.46
NME3-208ENST00000565379 RIT1Q92963 219 aa24.18■■□□□ 1.46
NME3-208ENST00000565379 MIB2Q96AX9 1013 aa24.18■■□□□ 1.46
NME3-208ENST00000565379 ELAC2Q9BQ52 826 aaKnown RBP24.18■■□□□ 1.46
NME3-208ENST00000565379 C17orf105B2RV13 164 aa24.17■■□□□ 1.46
NME3-208ENST00000565379 SNX3O60493 162 aa24.17■■□□□ 1.46
NME3-208ENST00000565379 IFI6P09912 130 aa24.17■■□□□ 1.46
NME3-208ENST00000565379 NCF2P19878 526 aaPredicted RBP24.17■■□□□ 1.46
NME3-208ENST00000565379 FRKP42685 505 aaPredicted RBP24.17■■□□□ 1.46
NME3-208ENST00000565379 PRR30Q53SZ7 412 aaPredicted RBP24.17■■□□□ 1.46
NME3-208ENST00000565379 GALNT12Q8IXK2 581 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms