RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 ZNF574Q6ZN55 896 aaPredicted RBP11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 CCDC80Q76M96 950 aa11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 ARHGAP22Q7Z5H3 698 aa11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 VTCN1Q7Z7D3 282 aa11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 RNF130Q86XS8 419 aa11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 HIPK1Q86Z02 1210 aa11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 D2HGDHQ8N465 521 aa11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 OR2L5Q8NG80 312 aa11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 OR5AK3PQ8NH89 298 aa11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 PSMA8Q8TAA3 256 aa11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 NEURL3Q96EH8 262 aa11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 KCNC2Q96PR1 638 aa11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 KLHL25Q9H0H3 589 aa11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 GABARAPL1Q9H0R8 117 aa11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 CLK4Q9HAZ1 481 aaKnown RBP11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 FANCEQ9HB96 536 aa11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 PRDM7Q9NQW5 492 aa11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 ACSS1Q9NUB1 689 aaPredicted RBP11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 ADPRHL2Q9NX46 363 aa11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 TOR4AQ9NXH8 423 aa11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 IFT80Q9P2H3 777 aaPredicted RBP11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 PILRAQ9UKJ1 303 aa11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 ABCG2Q9UNQ0 655 aa11.94□□□□□ -0.5
NSMCE1-208ENST00000565070 C4orf51C9J302 202 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 SUV39H1O43463 412 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 SRPX2O60687 465 aaPredicted RBP11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 PGM3O95394 542 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 ALBP02768 609 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 HIST1H1TP22492 207 aaPredicted RBP11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 ALDH9A1P49189 494 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 NOVA1P51513 510 aaKnown RBP11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 KCNJ10P78508 379 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 SIM1P81133 766 aaPredicted RBP11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 VLDLRP98155 873 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 ZFP36L1Q07352 338 aaKnown RBP11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 KCTD21Q4G0X4 260 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 IQCCQ4KMZ1 466 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 SAXO2Q658L1 398 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 OR2T5Q6IEZ7 315 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 MRM1Q6IN84 353 aaKnown RBP11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 TMPRSS9Q7Z410 1059 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 HS3ST5Q8IZT8 346 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 TSPAN14Q8NG11 270 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 OR2T29Q8NH02 315 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 ZFP28Q8NHY6 868 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 C7orf34Q96L11 122 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 DEPDC7Q96QD5 511 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 DOHHQ9BU89 302 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 NLNQ9BYT8 704 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 STRADBQ9C0K7 418 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 SMURF2Q9HAU4 748 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 VNN3Q9NY84 501 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 PLCL2Q9UPR0 1127 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 MAP4K5Q9Y4K4 846 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 PTPRZ1P23471 2315 aaPredicted RBP11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 ZNF292O60281 2723 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 SMIM31A0A1B0GVY4 71 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 A8MU76 341 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 ERI3O43414 337 aaKnown RBP11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 CTSVO60911 334 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 E2F6O75461 281 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 DKK1O94907 266 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 SLC35G6P0C7Q6 338 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 FTH1P19P0C7X4 201 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 ARAFP10398 606 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 CSTF2P33240 577 aaKnown RBP eCLIP11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 SOAT1P35610 550 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 PRIM2P49643 509 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 SEPHS1P49903 392 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 MANFP55145 182 aaKnown RBP11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 SELENOWP63302 87 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 INSM1Q01101 510 aaPredicted RBP11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 SCARB2Q14108 478 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 SLC9A5Q14940 896 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 TCTE1Q5JU00 501 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 MANEAQ5SRI9 462 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 NDUFAF5Q5TEU4 345 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 CDCP2Q5VXM1 449 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 FAM180BQ6P0A1 224 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 FBXO42Q6P3S6 717 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 DNAJC22Q8N4W6 341 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 CAMKVQ8NCB2 501 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 AGBL5Q8NDL9 886 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 SRFBP1Q8NEF9 429 aaKnown RBP11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 ZBED6CLQ96FA7 236 aaPredicted RBP11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 OR2A5Q96R48 311 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 FAIM2Q9BWQ8 316 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 SOX17Q9H6I2 414 aaPredicted RBP11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 SIRT3Q9NTG7 399 aaPredicted RBP11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 NDUFA13Q9P0J0 144 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 PADI2Q9Y2J8 665 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 ASB4Q9Y574 426 aa11.93□□□□□ -0.5
NSMCE1-208ENST00000565070 A0A0G2JN53 185 aa11.92□□□□□ -0.5
NSMCE1-208ENST00000565070 A0A0J9YVX5 310 aa11.92□□□□□ -0.5
NSMCE1-208ENST00000565070 CLIC3O95833 236 aa11.92□□□□□ -0.5
NSMCE1-208ENST00000565070 ATP5A1P25705 553 aaKnown RBP11.92□□□□□ -0.5
NSMCE1-208ENST00000565070 AQP1P29972 269 aa11.92□□□□□ -0.5
NSMCE1-208ENST00000565070 CASP9P55211 416 aa11.92□□□□□ -0.5
NSMCE1-208ENST00000565070 ITGA1P56199 1179 aa11.92□□□□□ -0.5
NSMCE1-208ENST00000565070 PCBP3P57721 371 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms