RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 TIMM10P62072 90 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 CSNK2BP67870 215 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 RBPJQ06330 500 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 CBX3Q13185 183 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 PTK6Q13882 451 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 STK38Q15208 465 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 ZNF74Q16587 644 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 ZNF674Q2M3X9 581 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 VWC2Q2TAL6 325 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 TTMPQ5BVD1 217 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 SEL1L3Q68CR1 1132 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 SPECC1LQ69YQ0 1117 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 KLHL10Q6JEL2 608 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 C11orf63Q6NUN7 778 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 UGT3A1Q6NUS8 523 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 C16orf87Q6PH81 154 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 BLOC1S2Q6QNY1 142 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 MOXD1Q6UVY6 613 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 TMEM179Q6ZVK1 233 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 GPR142Q7Z601 462 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 TMEM110Q86TL2 294 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 ZFAND4Q86XD8 727 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 HPS6Q86YV9 775 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 C11orf53Q8IXP5 236 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 ZNF595Q8IYB9 648 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 TMCO5AQ8N6Q1 288 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 ATAD1Q8NBU5 361 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 NOA1Q8NC60 698 aaKnown RBP3.41□□□□□ -1.86
CHD9-212ENST00000564641 CCDC197Q8NCU1 140 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 OR5T2Q8NGG2 359 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 AGAP11Q8TF27 550 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 NPRL2Q8WTW4 380 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 KIFAP3Q92845 792 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 EXT2Q93063 718 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 CCDC51Q96ER9 411 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 C12orf42Q96LP6 360 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 GDAP1L1Q96MZ0 367 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 TCHPQ9BT92 498 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 NACA2Q9H009 215 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 WNT5BQ9H1J7 359 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 IL1RAPL2Q9NP60 686 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 DMAP1Q9NPF5 467 aaPredicted RBP3.41□□□□□ -1.86
CHD9-212ENST00000564641 PA2G4Q9UQ80 394 aaKnown RBP3.41□□□□□ -1.86
CHD9-212ENST00000564641 ZNF510Q9Y2H8 683 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 L3MBTL1Q9Y468 752 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 GMEB1Q9Y692 573 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 SAR1BQ9Y6B6 198 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 LAMA3Q16787 3333 aa3.41□□□□□ -1.86
CHD9-212ENST00000564641 MAST2Q6P0Q8 1798 aa3.4□□□□□ -1.86
CHD9-212ENST00000564641 MYH1P12882 1939 aa3.4□□□□□ -1.86
CHD9-212ENST00000564641 MYH8P13535 1937 aa3.4□□□□□ -1.86
CHD9-212ENST00000564641 RFX7Q2KHR2 1363 aa3.4□□□□□ -1.86
CHD9-212ENST00000564641 TMEM221A6NGB7 291 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 OOEPA6NGQ2 149 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 A8MXK9 166 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 CETN3O15182 167 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 SURF6O75683 361 aaKnown RBP3.4□□□□□ -1.87
CHD9-212ENST00000564641 FLOT1O75955 427 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 CCDC166P0CW27 439 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 TROVE2P10155 538 aaKnown RBP eCLIP3.4□□□□□ -1.87
CHD9-212ENST00000564641 CA8P35219 290 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 CAPGP40121 348 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 CCNG1P51959 295 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 KLC1Q07866 573 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 ACSM1Q08AH1 577 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 C2orf76Q3KRA6 126 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 SYT14P1Q58G82 188 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 GLRA4Q5JXX5 417 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 KCTD16Q68DU8 428 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 KRT39Q6A163 491 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 EMBQ6PCB8 327 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 RAPH1Q70E73 1250 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 DET1Q7L5Y6 550 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 OTOAQ7RTW8 1153 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 HOOK3Q86VS8 718 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 ERICH1Q86X53 443 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 CD302Q8IX05 232 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 IQCF2Q8IXL9 164 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 IFT20Q8IY31 132 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 MYOCDQ8IZQ8 938 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 ABHD12Q8N2K0 398 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 CARNMT1Q8N4J0 409 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 MMGT1Q8N4V1 131 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 RNF10Q8N5U6 811 aaKnown RBP3.4□□□□□ -1.87
CHD9-212ENST00000564641 SMYD1Q8NB12 490 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 AQP11Q8NBQ7 271 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 AENQ8WTP8 325 aaKnown RBP3.4□□□□□ -1.87
CHD9-212ENST00000564641 KCNE4Q8WWG9 221 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 C8orf76Q96K31 380 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 CAPZA3Q96KX2 299 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 IFT74Q96LB3 600 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 MUS81Q96NY9 551 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 ZIM3Q96PE6 472 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 NDNQ99608 321 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 LPAR4Q99677 370 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 INPP5KQ9BT40 448 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 FAM129AQ9BZQ8 928 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 MTHFD2LQ9H903 347 aaPredicted RBP3.4□□□□□ -1.87
CHD9-212ENST00000564641 GNB4Q9HAV0 340 aa3.4□□□□□ -1.87
CHD9-212ENST00000564641 GPN1Q9HCN4 374 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms