RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 GRAMD2AQ8IUY3 354 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 RELL2Q8NC24 303 aaPredicted RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 STKLD1Q8NE28 680 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 FAM76AQ8TAV0 307 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 GIPC3Q8TF64 312 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 C11orf52Q96A22 123 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 ZNF501Q96CX3 271 aaPredicted RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 ALKBH3Q96Q83 286 aaPredicted RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 NLNQ9BYT8 704 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 LRRCC1Q9C099 1032 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 WDR76Q9H967 626 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 SLC25A19Q9HC21 320 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 PALMDQ9NP74 551 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.2□□□□□ -2.06
CHD9-209ENST00000564255 KLHL8Q9P2G9 620 aaPredicted RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 KLK11Q9UBX7 282 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 TUBGCP4Q9UGJ1 667 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 ICAM5Q9UMF0 924 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 B9D1Q9UPM9 204 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 TCF19Q9Y242 345 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 WDR81Q562E7 1941 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 IQCMA0A1B0GVH7 501 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 INPP4BO15327 924 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 ZFAND5O76080 213 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 IGHEP01854 428 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 RPLP0P05388 317 aaKnown RBP2.19□□□□□ -2.06
CHD9-209ENST00000564255 MBL2P11226 248 aaPredicted RBP2.19□□□□□ -2.06
CHD9-209ENST00000564255 CYP11B1P15538 503 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 SELEP16581 610 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 CHRNB4P30926 498 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 TRIM23P36406 574 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 SLC1A6P48664 564 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 PPIAP62937 165 aaKnown RBP2.19□□□□□ -2.06
CHD9-209ENST00000564255 HERVK_113P63132 956 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 ERVK-8P63133 956 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 SPIBQ01892 262 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 CHIT1Q13231 466 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 GPM6BQ13491 265 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 BTG3Q14201 252 aaPredicted RBP2.19□□□□□ -2.06
CHD9-209ENST00000564255 HKDC1Q2TB90 917 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 ASPHD2Q6ICH7 369 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 LEG1Q6P5S2 330 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 C3P1Q6ZMU1 363 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 Q71RC1 249 aaPredicted RBP2.19□□□□□ -2.06
CHD9-209ENST00000564255 NOTCH2NLQ7Z3S9 236 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 ERASQ7Z444 233 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 RANBP3LQ86VV4 465 aaPredicted RBP2.19□□□□□ -2.06
CHD9-209ENST00000564255 CBWD2Q8IUF1 395 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 UNC5CLQ8IV45 518 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 CCDC36Q8IYA8 594 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 OR4F5Q8NH21 305 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 THRSPQ92748 146 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 MAGED4Q96JG8 741 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 INPP4AQ96PE3 977 aaPredicted RBP2.19□□□□□ -2.06
CHD9-209ENST00000564255 ERVK-6Q9BXR3 956 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 NMUR1Q9HB89 426 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 UBE2TQ9NPD8 197 aaPredicted RBP2.19□□□□□ -2.06
CHD9-209ENST00000564255 AGPAT5Q9NUQ2 364 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 PPP1R3CQ9UQK1 317 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 IGKV2D-30A0A075B6S6 120 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 EME2A4GXA9 379 aaPredicted RBP2.19□□□□□ -2.06
CHD9-209ENST00000564255 ERVV-2B6SEH9 535 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 G3V2L1 256 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 H0YCG3 227 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 MCF2LO15068 1137 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 TBX19O60806 448 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 ZNF821O75541 412 aaPredicted RBP2.19□□□□□ -2.06
CHD9-209ENST00000564255 TOXO94900 526 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 OR4F21O95013 312 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 CHRNA1P02708 482 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 CA3P07451 260 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 IQCF3P0C7M6 154 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 CALCBP10092 127 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 PRG2P13727 222 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 RPS2P15880 293 aaKnown RBP2.19□□□□□ -2.06
CHD9-209ENST00000564255 PAICSP22234 425 aaKnown RBP2.19□□□□□ -2.06
CHD9-209ENST00000564255 OPRL1P41146 370 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 PGFP49763 221 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 GBX2P52951 348 aaPredicted RBP2.19□□□□□ -2.06
CHD9-209ENST00000564255 HNRNPDQ14103 355 aaKnown RBP2.19□□□□□ -2.06
CHD9-209ENST00000564255 TRIP10Q15642 601 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 MLF2Q15773 248 aaPredicted RBP2.19□□□□□ -2.06
CHD9-209ENST00000564255 ZKSCAN8Q15776 578 aaPredicted RBP2.19□□□□□ -2.06
CHD9-209ENST00000564255 DCAF4L1Q3SXM0 396 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 POM121L1PQ3SYA9 428 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 ADAMTSL4-AS1Q5T5F5 129 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 ATAD3BQ5T9A4 648 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 DDI2Q5TDH0 399 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 PWWP2BQ6NUJ5 590 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 Q6ZSR9 355 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 LINC00518Q8N0U6 118 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 NFAM1Q8NET5 270 aaPredicted RBP2.19□□□□□ -2.06
CHD9-209ENST00000564255 OR52M1Q8NGK5 317 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 OR10G7Q8NGN6 311 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 MRGPRDQ8TDS7 321 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 N4BP2L2Q92802 583 aaPredicted RBP2.19□□□□□ -2.06
CHD9-209ENST00000564255 VSTM2LQ96N03 204 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 PGLYRP2Q96PD5 576 aa2.19□□□□□ -2.06
CHD9-209ENST00000564255 CPXM1Q96SM3 734 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms