RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 TMEM151AQ8N4L1 468 aa14.64□□□□□ -0.07
RNF40-205ENST00000563909 BANPQ8N9N5 519 aa14.64□□□□□ -0.07
RNF40-205ENST00000563909 UBTD2Q8WUN7 234 aa14.64□□□□□ -0.07
RNF40-205ENST00000563909 APOPT1Q96IL0 206 aa14.64□□□□□ -0.07
RNF40-205ENST00000563909 TMEM79Q9BSE2 394 aa14.64□□□□□ -0.07
RNF40-205ENST00000563909 CD244Q9BZW8 370 aa14.64□□□□□ -0.07
RNF40-205ENST00000563909 IQCGQ9H095 443 aaKnown RBP14.64□□□□□ -0.07
RNF40-205ENST00000563909 VIPAS39Q9H9C1 493 aa14.64□□□□□ -0.07
RNF40-205ENST00000563909 UBTD1Q9HAC8 227 aa14.64□□□□□ -0.07
RNF40-205ENST00000563909 TUBA8Q9NY65 449 aaPredicted RBP14.64□□□□□ -0.07
RNF40-205ENST00000563909 ADGRE2Q9UHX3 823 aa14.64□□□□□ -0.07
RNF40-205ENST00000563909 ZNF223Q9UK11 482 aaPredicted RBP14.64□□□□□ -0.07
RNF40-205ENST00000563909 SLC22A14Q9Y267 594 aa14.64□□□□□ -0.07
RNF40-205ENST00000563909 PCDHGB3Q9Y5G1 929 aa14.64□□□□□ -0.07
RNF40-205ENST00000563909 KCNE2Q9Y6J6 123 aa14.64□□□□□ -0.07
RNF40-205ENST00000563909 SH3D21A4FU49 640 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 STX16-NPEPL1H3BU86 382 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 STX16O14662 325 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 CCNT2O60583 730 aaKnown RBP14.63□□□□□ -0.07
RNF40-205ENST00000563909 EPPINO95925 133 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 TIMP3P35625 211 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 GRK3P35626 688 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 SOX3P41225 446 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 GDF5P43026 501 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 DNASE1L1P49184 302 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 FOXO1Q12778 655 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 ACKR1Q16570 336 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 C18orf21Q32NC0 220 aaPredicted RBP14.63□□□□□ -0.07
RNF40-205ENST00000563909 TNFAIP8L3Q5GJ75 292 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 C10orf62Q5T681 223 aaPredicted RBP14.63□□□□□ -0.07
RNF40-205ENST00000563909 METTL2BQ6P1Q9 378 aaKnown RBP14.63□□□□□ -0.07
RNF40-205ENST00000563909 QSOX2Q6ZRP7 698 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 HIPK1Q86Z02 1210 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 OR4K3Q96R72 315 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 SEMA4BQ9NPR2 832 aaPredicted RBP14.63□□□□□ -0.07
RNF40-205ENST00000563909 NECTIN3Q9NQS3 549 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 DNAJC11Q9NVH1 559 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 GPRC5BQ9NZH0 403 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 MID2Q9UJV3 735 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 SH2B3Q9UQQ2 575 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 ACTL7BQ9Y614 415 aa14.63□□□□□ -0.07
RNF40-205ENST00000563909 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.63□□□□□ -0.07
RNF40-205ENST00000563909 K7EPI3 171 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 PRKNO60260 465 aaPredicted RBP14.62□□□□□ -0.07
RNF40-205ENST00000563909 GALR3O60755 368 aaPredicted RBP14.62□□□□□ -0.07
RNF40-205ENST00000563909 ZFAND5O76080 213 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 SBK3P0C264 359 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 ATP5F1P24539 256 aaPredicted RBP14.62□□□□□ -0.07
RNF40-205ENST00000563909 SKP1P63208 163 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 ACSF3Q4G176 576 aaPredicted RBP14.62□□□□□ -0.07
RNF40-205ENST00000563909 DEFB134Q4QY38 66 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 FBXO48Q5FWF7 155 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 RTL4Q6ZR62 310 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 EXOC3L1Q86VI1 746 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 LACC1Q8IV20 430 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 SLC22A9Q8IVM8 553 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 AFAP1L2Q8N4X5 818 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 PTGR2Q8N8N7 351 aaPredicted RBP14.62□□□□□ -0.07
RNF40-205ENST00000563909 CCDC63Q8NA47 563 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 MFSD9Q8NBP5 474 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 ZNF740Q8NDX6 193 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 PPP1R14CQ8TAE6 165 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 RDH11Q8TC12 318 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 SLC5A11Q8WWX8 675 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 SREK1Q8WXA9 508 aaKnown RBP14.62□□□□□ -0.07
RNF40-205ENST00000563909 NCLNQ969V3 563 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 ESAMQ96AP7 390 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 CCDC126Q96EE4 140 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 PHF21BQ96EK2 531 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 VMP1Q96GC9 406 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 GSX2Q9BZM3 304 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 TMBIM4Q9HC24 238 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 SSU72Q9NP77 194 aaKnown RBP14.62□□□□□ -0.07
RNF40-205ENST00000563909 PRDM9Q9NQV7 894 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 JKAMPQ9P055 326 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 OPTCQ9UBM4 332 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 PLLPQ9Y342 182 aa14.62□□□□□ -0.07
RNF40-205ENST00000563909 IGKV3D-11A0A0A0MRZ8 115 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 AHRRA9YTQ3 701 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 WWP2O00308 870 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 CLGNO14967 610 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 NDUFS4O43181 175 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 PLIN3O60664 434 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 SPAG7O75391 227 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 B3GALT4O96024 378 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 PROCP04070 461 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 CDH1P12830 882 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 ALOX12P18054 663 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 GNAZP19086 355 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 PIK3CGP48736 1102 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 PTH2RP49190 550 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 CCR8P51685 355 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 PDK4Q16654 411 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 SNX31Q8N9S9 440 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 MAPK1IP1LQ8NDC0 245 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 ABHD11Q8NFV4 315 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 NEIL2Q969S2 332 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 RASL10BQ96S79 203 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 PELI2Q9HAT8 420 aa14.61□□□□□ -0.07
RNF40-205ENST00000563909 SACM1LQ9NTJ5 587 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms