RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 Q6ZSR9 355 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 SNX20Q7Z614 316 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 CCDC25Q86WR0 208 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 VRK3Q8IV63 474 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 AFAP1L2Q8N4X5 818 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 SLC15A4Q8N697 577 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 PQLC3Q8N755 202 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 TM4SF19Q96DZ7 209 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 ZNF48Q96MX3 618 aaPredicted RBP9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 RILPQ96NA2 401 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 HBEGFQ99075 208 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 SLC25A51Q9H1U9 297 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 FAM96AQ9H5X1 160 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 HAUS4Q9H6D7 363 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 SAE1Q9UBE0 346 aaPredicted RBP9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 ASH2LQ9UBL3 628 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 POU2F3Q9UKI9 436 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 MMACHCQ9Y4U1 282 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 RNF114Q9Y508 228 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 PCDHB14Q9Y5E9 798 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 KMT2AQ03164 3969 aa9.35□□□□□ -0.91
HDGFL3-204ENST00000563790 LOC285095A0A1B0GVY8 99 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 KRT87PA6NCN2 255 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 J3QLI3 93 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 KCNK1O00180 336 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 XPNPEP2O43895 674 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 GALR3O60755 368 aaPredicted RBP9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 ACRV1P26436 265 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 CDKN1CP49918 316 aaPredicted RBP9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 SLC37A1P57057 533 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 PROK1P58294 105 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 OLR1P78380 273 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 UBXN1Q04323 297 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 GBE1Q04446 702 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 PRDX1Q06830 199 aaKnown RBP9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 TSC22D1Q15714 1073 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 SWI5Q1ZZU3 235 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 KBTBD12Q3ZCT8 623 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 TCHHL1Q5QJ38 904 aaPredicted RBP9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 ICE2Q659A1 982 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 PPP1R2P3Q6NXS1 205 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 CHMP1BQ7LBR1 199 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 TMEM132CQ8N3T6 1108 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 ANKS4BQ8N8V4 417 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 OR4K2Q8NGD2 314 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 SPATA22Q8NHS9 363 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 DIO2Q92813 273 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 KRTAP4-5Q9BYR2 181 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 POTEKPQ9BYX7 375 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 NUP62CLQ9H1M0 184 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 WWOXQ9NZC7 414 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 CLDN16Q9Y5I7 305 aa9.34□□□□□ -0.91
HDGFL3-204ENST00000563790 TRBV5-4A0A0C4DH59 114 aa9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 E7ENX8 843 aa9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 GCM2O75603 506 aaPredicted RBP9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 REM1O75628 298 aa9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 SKP1P63208 163 aa9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 IFI35P80217 286 aaPredicted RBP9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 ELAVL1Q15717 326 aaKnown RBP9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 NTRK2Q16620 822 aa9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 GPR33Q49SQ1 333 aa9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 CCSMST1Q4G0I0 132 aa9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 CCDC183Q5T5S1 534 aa9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 MEI1Q5TIA1 1274 aa9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 BICRALQ6AI39 1079 aa9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 TIGD3Q6B0B8 471 aa9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 TTC23LQ6PF05 361 aa9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 ZNF321PQ8N8H1 164 aa9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 MORN4Q8NDC4 146 aa9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 USB1Q9BQ65 265 aaKnown RBP9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 DENND2DQ9H6A0 471 aaPredicted RBP9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 TAS2R16Q9NYV7 291 aa9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 C1RLQ9NZP8 487 aa9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 MGAT4BQ9UQ53 548 aa9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 EMC9Q9Y3B6 208 aa9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 ARL5AQ9Y689 179 aa9.33□□□□□ -0.92
HDGFL3-204ENST00000563790 UQCRHLA0A096LP55 91 aa9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 A0A0G2JMP0 313 aa9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 A0A0X1KG70 313 aa9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 WI2-2373I1.2A0A1W2PRP0 233 aa9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 FAM181BA6NEQ2 426 aa9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 EPOP01588 193 aa9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 TFP02787 698 aa9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 SLC35E2P0CK97 266 aa9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 DDX5P17844 614 aaKnown RBP9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 IL32P24001 234 aa9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 ARNTP27540 789 aa9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 CSE1LP55060 971 aaKnown RBP9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 RPS15AP62244 130 aaKnown RBP9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 PDCD1Q15116 288 aa9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 BCL2A1Q16548 175 aa9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 MST1LQ2TV78 715 aa9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 SLC22A25Q6T423 547 aa9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 ADCK2Q7Z695 626 aa9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 SERPINA9Q86WD7 417 aa9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 IFNEQ86WN2 208 aa9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 OR4M2Q8NGB6 313 aa9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 CLDND2Q8NHS1 167 aa9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 NUBPLQ8TB37 319 aa9.32□□□□□ -0.92
HDGFL3-204ENST00000563790 FNDC9Q8TBE3 224 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms