RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 CD47Q08722 323 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 PSG7Q13046 419 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 ZNF658BQ4V348 819 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 SEL1L2Q5TEA6 688 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 C1orf189Q5VU69 101 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 MOB2Q70IA6 237 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 TICAM2Q86XR7 235 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 KLHL7Q8IXQ5 586 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 ELSPBP1Q96BH3 223 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 BIRC7Q96CA5 298 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 C16orf74Q96GX8 76 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 GBP5Q96PP8 586 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 S1PR3Q99500 378 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 ZNF184Q99676 751 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 SRD5A3Q9H8P0 318 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 GDF3Q9NR23 364 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 CFDP1Q9UEE9 299 aaPredicted RBP2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 CIDEBQ9UHD4 219 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 CA5BQ9Y2D0 317 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 POMT1Q9Y6A1 747 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 RAI1Q7Z5J4 1906 aaPredicted RBP2.09□□□□□ -2.08
HMGB1P33-201ENST00000563485 SLC33A1O00400 549 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 IFIT3O14879 490 aaKnown RBP2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 NME6O75414 186 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 RAD51DO75771 328 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 EPOP01588 193 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 ASNSP08243 561 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 NR2C1P13056 603 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 PVRP15151 417 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 IDSP22304 550 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 UCP1P25874 307 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 HNRNPA3P51991 378 aaKnown RBP2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 RIPPLY3P57055 190 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 HEPACAMQ14CZ8 416 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 MS4A13Q5J8X5 152 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 ZNF658Q5TYW1 1059 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 SLC22A10Q63ZE4 541 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 Q6P435 159 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 PRSS48Q7RTY5 328 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 METTL23Q86XA0 190 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 TGIF2LYQ8IUE0 185 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 KLHDC8AQ8IYD2 350 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 THNSL1Q8IYQ7 743 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 C14orf178Q8N769 122 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 NHLRC2Q8NBF2 726 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 ULK4Q96C45 1275 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 CAPNS2Q96L46 248 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 BAG1Q99933 345 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 ACPTQ9BZG2 426 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 NMUR2Q9GZQ4 415 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 MIEF1Q9NQG6 463 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 ZFP37Q9Y6Q3 630 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 LRRK1Q38SD2 2015 aa2.08□□□□□ -2.08
HMGB1P33-201ENST00000563485 IGLV8-61A0A075B6I0 122 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 B4DXG7 233 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 H7C0S8 307 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 NUDT21O43809 227 aaKnown RBP2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 ATP9AO75110 1047 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 STBD1O95210 358 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 NUDT14O95848 222 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 XCR1P46094 333 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 TKTL1P51854 596 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 SLC7A2P52569 658 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 EFNA3P52797 238 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 MECOMQ03112 1051 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 SLC34A1Q06495 639 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 ARHGAP1Q07960 439 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 TFCP2Q12800 502 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 SERTAD2Q14140 314 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 MPP7Q5T2T1 576 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 RHBDD2Q6NTF9 364 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 SCARA5Q6ZMJ2 495 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 UNC5CLQ8IV45 518 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 GPR65Q8IYL9 337 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 THEM5Q8N1Q8 247 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 Q8N9L7 120 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 NFAM1Q8NET5 270 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 GGHQ92820 318 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 PRAM1Q96QH2 718 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 PARK7Q99497 189 aaKnown RBP2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 DNAJC11Q9NVH1 559 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 APOBEC3BQ9UH17 382 aaKnown RBP2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 CCPG1Q9ULG6 757 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 ERVK-19Q9WJR5 959 aa2.07□□□□□ -2.08
HMGB1P33-201ENST00000563485 CDC42BPBQ9Y5S2 1711 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 PDXKO00764 312 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 PSMD3O43242 534 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 EMC8O43402 210 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 TSPAN2O60636 221 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 SERF1AO75920 110 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 SLC2A10O95528 541 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 CPNE6O95741 557 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 TPBGLP0DKB5 382 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 ZNF131P52739 623 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 SCN1BQ07699 218 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 HSPA14Q0VDF9 509 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 LRRC38Q5VT99 294 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 TAF3Q5VWG9 929 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 OTPQ5XKR4 325 aa2.06□□□□□ -2.08
HMGB1P33-201ENST00000563485 STEAP1BQ6NZ63 245 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms