RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 RBBP4Q09028 425 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 NFATC2Q13469 925 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 DRP2Q13474 957 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 SNX1Q13596 522 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 KLF5Q13887 457 aaPredicted RBP2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 TRIP10Q15642 601 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 ADPRMQ3LIE5 342 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 C14orf177Q52M58 125 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 PLPP4Q5VZY2 271 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 BSPRYQ5W0U4 402 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 ZNF613Q6PF04 617 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 RGS9BPQ6ZS82 235 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 ITIH5Q86UX2 942 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 LCA5Q86VQ0 697 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 SLC22A16Q86VW1 577 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 CATSPERDQ86XM0 798 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 GRAMD2AQ8IUY3 354 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 LINC00518Q8N0U6 118 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 CERS5Q8N5B7 392 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 MINDY2Q8NBR6 621 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 DQX1Q8TE96 717 aaKnown RBP2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 TMEM37Q8WXS4 190 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 MOCOSQ96EN8 888 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 PKNOX2Q96KN3 472 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 LINC00479Q96M42 142 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 NAP1L5Q96NT1 182 aaPredicted RBP2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 TNFRSF13CQ96RJ3 184 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 OVOL2Q9BRP0 275 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 MCRIP2Q9BUT9 160 aaKnown RBP2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 TPPP3Q9BW30 176 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 FGFBP2Q9BYJ0 223 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 TMEM117Q9H0C3 514 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 MED20Q9H944 212 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 TAS2R16Q9NYV7 291 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 NLGN3Q9NZ94 848 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 VPS54Q9P1Q0 977 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 MIOXQ9UGB7 285 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 BCAP29Q9UHQ4 241 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 LAMP5Q9UJQ1 280 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 IKZF3Q9UKT9 509 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 RABL2BQ9UNT1 228 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 KLHDC2Q9Y2U9 406 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 MFHAS1Q9Y4C4 1052 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 FKBP7Q9Y680 259 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 CSNK1G3Q9Y6M4 447 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 U3KQV3 271 aa2.74□□□□□ -1.97
SHCBP1-202ENST00000563219 RNF123Q5XPI4 1314 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 LOC390937A0A1W2PQ73 354 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 MEX3AA1L020 520 aaKnown RBP2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 MPTX1A8MV57 137 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 NPIPB9F8W1W9 429 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 CHEK1O14757 476 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 GMFGO60234 142 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 DUS4LO95620 317 aaKnown RBP2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 FAM200BP0CF97 657 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 GSTT2P0CG29 244 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 GSTT2BP0CG30 244 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 SELEP16581 610 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 AOC1P19801 751 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 HNRNPA2B1P22626 353 aaKnown RBP2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 PAX7P23759 505 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 GPR183P32249 361 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 PTGFRP43088 359 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 TSFMP43897 325 aaKnown RBP2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 FHITP49789 147 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 HNMTP50135 292 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 CCR4P51679 360 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 ARFIP1P53367 373 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 HMGN5P82970 282 aaKnown RBP2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 HSPA14Q0VDF9 509 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 PDZK1IP1Q13113 114 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 SNTB2Q13425 540 aaKnown RBP2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 GCKRQ14397 625 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 ZNF528Q3MIS6 628 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 RFTN2Q52LD8 501 aaPredicted RBP2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 RIPPLY2Q5TAB7 128 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 FAM159AQ6UWV7 190 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 ABRAXAS1Q6UWZ7 409 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 FRRS1Q6ZNA5 592 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 ZNF497Q6ZNH5 498 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 CDHR3Q6ZTQ4 885 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 ASRGL1Q7L266 308 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 PPP1R42Q7Z4L9 355 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 KCNMB4Q86W47 210 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 SLC22A15Q8IZD6 547 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 BCORP1Q8N888 145 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 MLKLQ8NB16 471 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 GMCL1P1Q8NEA9 526 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 FAM71CQ8NEG0 241 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 OR52B6Q8NGF0 335 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 OR4D10Q8NGI6 311 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 OR5M9Q8NGP3 310 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 LURAP1Q96LR2 239 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 ACCSQ96QU6 501 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 RAB40CQ96S21 281 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 GSDMCQ9BYG8 508 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 NMNAT2Q9BZQ4 307 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 LIME1Q9H400 295 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 RIBC2Q9H4K1 309 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms