RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 INHBAP08476 426 aa14.92□□□□□ -0.02
SNX1-213ENST00000561026 ENDOUP21128 410 aaKnown RBP14.92□□□□□ -0.02
SNX1-213ENST00000561026 CCNG1P51959 295 aa14.92□□□□□ -0.02
SNX1-213ENST00000561026 C10orf62Q5T681 223 aaPredicted RBP14.92□□□□□ -0.02
SNX1-213ENST00000561026 WLSQ5T9L3 541 aa14.92□□□□□ -0.02
SNX1-213ENST00000561026 OR52E8Q6IFG1 317 aa14.92□□□□□ -0.02
SNX1-213ENST00000561026 DMRTC2Q8IXT2 367 aaPredicted RBP14.92□□□□□ -0.02
SNX1-213ENST00000561026 ZNF441Q8N8Z8 693 aa14.92□□□□□ -0.02
SNX1-213ENST00000561026 TP53INP1Q96A56 240 aa14.92□□□□□ -0.02
SNX1-213ENST00000561026 TSPYL1Q9H0U9 437 aa14.92□□□□□ -0.02
SNX1-213ENST00000561026 EXO5Q9H790 373 aa14.92□□□□□ -0.02
SNX1-213ENST00000561026 ZBTB26Q9HCK0 441 aa14.92□□□□□ -0.02
SNX1-213ENST00000561026 ACKR4Q9NPB9 350 aa14.92□□□□□ -0.02
SNX1-213ENST00000561026 TEX10Q9NXF1 929 aaPredicted RBP14.92□□□□□ -0.02
SNX1-213ENST00000561026 PCTPQ9UKL6 214 aa14.92□□□□□ -0.02
SNX1-213ENST00000561026 ITGB1BP2Q9UKP3 347 aa14.92□□□□□ -0.02
SNX1-213ENST00000561026 CNOT11Q9UKZ1 510 aaKnown RBP14.92□□□□□ -0.02
SNX1-213ENST00000561026 TMCO1Q9UM00 188 aa14.92□□□□□ -0.02
SNX1-213ENST00000561026 SPG11Q96JI7 2443 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 C2orf92A0A1B0GVN3 265 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 A0A1W2PS29 197 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 ANKRD33BA6NCL7 494 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 LRRC3CA6NJW4 275 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 ACSL3O95573 720 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 KLK1P06870 262 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 HOXD4P09016 255 aaPredicted RBP14.91□□□□□ -0.02
SNX1-213ENST00000561026 COL6A2P12110 1019 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 PIK3R1P27986 724 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 SSTR4P31391 388 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 FUT7Q11130 342 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 TRAF3Q13114 568 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 NTRK2Q16620 822 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 TTC19Q6DKK2 380 aaPredicted RBP14.91□□□□□ -0.02
SNX1-213ENST00000561026 TAGAPQ8N103 731 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 NSUN5Q96P11 429 aaKnown RBP14.91□□□□□ -0.02
SNX1-213ENST00000561026 DOHHQ9BU89 302 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 CDC42EP4Q9H3Q1 356 aaKnown RBP14.91□□□□□ -0.02
SNX1-213ENST00000561026 QPCTLQ9NXS2 382 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 ALKBH4Q9NXW9 302 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 AHSPQ9NZD4 102 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 SPRR3Q9UBC9 169 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 XPR1Q9UBH6 696 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 ADAM29Q9UKF5 820 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 IKBKGQ9Y6K9 419 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 AKAP9Q99996 3911 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 HIVEP1P15822 2718 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 HCFC1P51610 2035 aa14.91□□□□□ -0.02
SNX1-213ENST00000561026 ANKRD17O75179 2603 aaKnown RBP14.9□□□□□ -0.02
SNX1-213ENST00000561026 A0A0G2JNJ9 132 aa14.9□□□□□ -0.02
SNX1-213ENST00000561026 SMIM24O75264 130 aa14.9□□□□□ -0.02
SNX1-213ENST00000561026 URI1O94763 535 aaPredicted RBP14.9□□□□□ -0.02
SNX1-213ENST00000561026 GABRA1P14867 456 aa14.9□□□□□ -0.02
SNX1-213ENST00000561026 ZFP36L2P47974 494 aaKnown RBP14.9□□□□□ -0.02
SNX1-213ENST00000561026 SERPINB9P50453 376 aa14.9□□□□□ -0.02
SNX1-213ENST00000561026 XKP51811 444 aa14.9□□□□□ -0.02
SNX1-213ENST00000561026 IFT88Q13099 833 aa14.9□□□□□ -0.02
SNX1-213ENST00000561026 WHAMMP3Q1A5X7 153 aa14.9□□□□□ -0.02
SNX1-213ENST00000561026 TSNAXIP1Q2TAA8 658 aa14.9□□□□□ -0.02
SNX1-213ENST00000561026 C1orf185Q5T7R7 199 aa14.9□□□□□ -0.02
SNX1-213ENST00000561026 TMEM64Q6YI46 380 aa14.9□□□□□ -0.02
SNX1-213ENST00000561026 MILR1Q7Z6M3 343 aa14.9□□□□□ -0.02
SNX1-213ENST00000561026 GALNT12Q8IXK2 581 aa14.9□□□□□ -0.02
SNX1-213ENST00000561026 MMGT1Q8N4V1 131 aa14.9□□□□□ -0.02
SNX1-213ENST00000561026 ZNF615Q8N8J6 731 aa14.9□□□□□ -0.02
SNX1-213ENST00000561026 OR4K14Q8NGD5 310 aa14.9□□□□□ -0.02
SNX1-213ENST00000561026 JSRP1Q96MG2 331 aaPredicted RBP14.9□□□□□ -0.02
SNX1-213ENST00000561026 PAFAH2Q99487 392 aa14.9□□□□□ -0.02
SNX1-213ENST00000561026 MRPL1Q9BYD6 325 aaKnown RBP14.9□□□□□ -0.02
SNX1-213ENST00000561026 Q9UFV3 132 aa14.9□□□□□ -0.02
SNX1-213ENST00000561026 DMGDHQ9UI17 866 aaKnown RBP14.9□□□□□ -0.02
SNX1-213ENST00000561026 PCDHGB3Q9Y5G1 929 aa14.9□□□□□ -0.02
SNX1-213ENST00000561026 CAPN14A8MX76 684 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 TRIM3O75382 744 aaPredicted RBP14.89□□□□□ -0.03
SNX1-213ENST00000561026 KRT38O76015 456 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 LRATO95237 230 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 CT62P0C5K7 136 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 ADH7P40394 386 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 RPS6KA2Q15349 733 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 GGTA1PQ4G0N0 100 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 TBCELQ5QJ74 424 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 CCNYL2Q5T2Q4 361 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 HLA-DQA1Q5Y7H0 255 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 TAOK1Q7L7X3 1001 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 PAGE2Q7Z2X7 111 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 CDH24Q86UP0 819 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 CLYBLQ8N0X4 340 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 METTL4Q8N3J2 472 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 OR4F6Q8NGB9 312 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 NEIL3Q8TAT5 605 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 TRPC4APQ8TEL6 797 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 IFT81Q8WYA0 676 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 DIO2Q92813 273 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 MRPL57Q9BQC6 102 aaKnown RBP14.89□□□□□ -0.03
SNX1-213ENST00000561026 OR10A5Q9H207 317 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 ELOVL6Q9H5J4 265 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 B4GALT7Q9UBV7 327 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 ZNF180Q9UJW8 692 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 NPFFR2Q9Y5X5 522 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 NINQ8N4C6 2090 aa14.89□□□□□ -0.03
SNX1-213ENST00000561026 A0A1B0GTL3 188 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms