RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 GPR75O95800 540 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 CASP3P42574 277 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 SSR2P43308 183 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 CPA2P48052 419 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 MASP1P48740 699 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 FNTAP49354 379 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 ARFIP1P53367 373 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 NAGLUP54802 743 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 DIO3P55073 304 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 HERVK_113P63132 956 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 ERVK-8P63133 956 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 PCDH1Q08174 1060 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 FOXF2Q12947 444 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 SLAMF1Q13291 335 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 ZNF267Q14586 743 aaPredicted RBP16.91■□□□□ 0.3
TPM1-226ENST00000560959 ACKR1Q16570 336 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 PDK4Q16654 411 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 EIPR1Q53HC9 387 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 DEPDC1Q5TB30 811 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 TIGD3Q6B0B8 471 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 OR4C11Q6IEV9 310 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 LUZP2Q86TE4 346 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 GPR180Q86V85 440 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 LAS2Q8IYD9 372 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 RIT1Q92963 219 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 WNT2BQ93097 391 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 CMTM7Q96FZ5 175 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 PBKQ96KB5 322 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 ERVK-6Q9BXR3 956 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 DERL2Q9GZP9 239 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 LZTFL1Q9NQ48 299 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 WWOXQ9NZC7 414 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 ADGRE2Q9UHX3 823 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 ERVK-19Q9WJR5 959 aa16.91■□□□□ 0.3
TPM1-226ENST00000560959 ZANQ9Y493 2812 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 TLN2Q9Y4G6 2542 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 FAM95CA0A1B0GW59 222 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 NCF1BA6NI72 391 aaPredicted RBP16.9■□□□□ 0.3
TPM1-226ENST00000560959 NCF1CA8MVU1 366 aaPredicted RBP16.9■□□□□ 0.3
TPM1-226ENST00000560959 DNALI1O14645 258 aaPredicted RBP16.9■□□□□ 0.3
TPM1-226ENST00000560959 SMAD7O15105 426 aaKnown RBP16.9■□□□□ 0.3
TPM1-226ENST00000560959 CTIFO43310 598 aaKnown RBP16.9■□□□□ 0.3
TPM1-226ENST00000560959 BANF1O75531 89 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 CLPSP04118 112 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 NCF1P14598 390 aaPredicted RBP16.9■□□□□ 0.3
TPM1-226ENST00000560959 CHMP24386 653 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 PTPN6P29350 595 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 CDC25BP30305 580 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 GCKP35557 465 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 MC3RP41968 323 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 SLCO1A2P46721 670 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 FBXW4P57775 412 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 TAS2R39P59534 338 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 IRF8Q02556 426 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 DCST1Q5T197 706 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 KHDRBS2Q5VWX1 349 aaKnown RBP16.9■□□□□ 0.3
TPM1-226ENST00000560959 STEAP4Q687X5 459 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 TMEM81Q6P7N7 255 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 TRMT10BQ6PF06 316 aaKnown RBP16.9■□□□□ 0.3
TPM1-226ENST00000560959 VWA5B2Q8N398 1253 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 ZCCHC7Q8N3Z6 543 aaKnown RBP16.9■□□□□ 0.3
TPM1-226ENST00000560959 SNX31Q8N9S9 440 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 C17orf47Q8NEP4 570 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 LRRC39Q96DD0 335 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 TRPS1Q9UHF7 1281 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 PTBP2Q9UKA9 531 aaKnown RBP16.9■□□□□ 0.3
TPM1-226ENST00000560959 STAB1Q9NY15 2570 aa16.9■□□□□ 0.3
TPM1-226ENST00000560959 KIAA1549Q9HCM3 1950 aa16.89■□□□□ 0.3
TPM1-226ENST00000560959 OR10H2O60403 315 aa16.89■□□□□ 0.29
TPM1-226ENST00000560959 TGFB1P01137 390 aa16.89■□□□□ 0.29
TPM1-226ENST00000560959 FREM3P0C091 2139 aa16.89■□□□□ 0.29
TPM1-226ENST00000560959 BUD31P41223 144 aaPredicted RBP16.89■□□□□ 0.29
TPM1-226ENST00000560959 HSPA7P48741 367 aa16.89■□□□□ 0.29
TPM1-226ENST00000560959 NRG3P56975 720 aa16.89■□□□□ 0.29
TPM1-226ENST00000560959 TNFRSF17Q02223 184 aa16.89■□□□□ 0.29
TPM1-226ENST00000560959 CHIT1Q13231 466 aa16.89■□□□□ 0.29
TPM1-226ENST00000560959 ZNF460Q14592 562 aa16.89■□□□□ 0.29
TPM1-226ENST00000560959 WIPI1Q5MNZ9 446 aaPredicted RBP16.89■□□□□ 0.29
TPM1-226ENST00000560959 BICRALQ6AI39 1079 aa16.89■□□□□ 0.29
TPM1-226ENST00000560959 C20orf204Q6ZNR8 217 aa16.89■□□□□ 0.29
TPM1-226ENST00000560959 GPSM1Q86YR5 675 aa16.89■□□□□ 0.29
TPM1-226ENST00000560959 PDIK1LQ8N165 341 aa16.89■□□□□ 0.29
TPM1-226ENST00000560959 FAM83FQ8NEG4 500 aaPredicted RBP16.89■□□□□ 0.29
TPM1-226ENST00000560959 RGMAQ96B86 450 aa16.89■□□□□ 0.29
TPM1-226ENST00000560959 TUBA1CQ9BQE3 449 aa16.89■□□□□ 0.29
TPM1-226ENST00000560959 GSX2Q9BZM3 304 aa16.89■□□□□ 0.29
TPM1-226ENST00000560959 RBSNQ9H1K0 784 aa16.89■□□□□ 0.29
TPM1-226ENST00000560959 TEX10Q9NXF1 929 aaPredicted RBP16.89■□□□□ 0.29
TPM1-226ENST00000560959 ZNF226Q9NYT6 803 aa16.89■□□□□ 0.29
TPM1-226ENST00000560959 DEFB108AA8MXU0 73 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 MSTNO14793 375 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 WISP3O95389 354 aaPredicted RBP16.88■□□□□ 0.29
TPM1-226ENST00000560959 SLC35E2BP0CK96 405 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 SLC35E2P0CK97 266 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 NAGAP17050 411 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 EPORP19235 508 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 ELK3P41970 407 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 TOMM20Q15388 145 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 HLA-DQA1Q5Y7H0 255 aa16.88■□□□□ 0.29
TPM1-226ENST00000560959 C18orf63Q68DL7 685 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms