RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 PCDHGA10Q9Y5H3 936 aa14.4□□□□□ -0.1
RABGGTA-219ENST00000560871 DYTNA2CJ06 578 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 GABRR3A8MPY1 467 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 CDK2AP1O14519 115 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 KLF11O14901 512 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 DYRK3O43781 588 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 F10P00742 488 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 CSNK2A2P19784 350 aaPredicted RBP14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 FEN1P39748 380 aaKnown RBP14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 OCRLQ01968 901 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 C2orf80Q0P641 193 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 MGAT2Q10469 447 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 ZNF169Q14929 603 aaPredicted RBP14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 PRSS53Q2L4Q9 553 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 PRICKLE4Q2TBC4 344 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 C6orf136Q5SQH8 315 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 ZNF468Q5VIY5 522 aaPredicted RBP14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 HSDL2Q6YN16 418 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 TRIM42Q8IWZ5 723 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 LRRC25Q8N386 305 aaPredicted RBP14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 FAM26EQ8N5C1 309 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 GOLGA6L1Q8N7Z2 621 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 CATSPER1Q8NEC5 780 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 CDC26Q8NHZ8 85 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 SUN3Q8TAQ9 357 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 EXOSC8Q96B26 276 aaKnown RBP14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 SNRNP40Q96DI7 357 aaKnown RBP14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 ZNF764Q96H86 408 aaPredicted RBP14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 CNPPD1Q9BV87 410 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 PNPOQ9NVS9 261 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 THAP1Q9NVV9 213 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 MAT2BQ9NZL9 334 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 COPS7AQ9UBW8 275 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 PSME2Q9UL46 239 aa14.39□□□□□ -0.11
RABGGTA-219ENST00000560871 FLNCQ14315 2725 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 PEX11AO75192 247 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 S1PR1P21453 382 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 TRHRP34981 398 aaPredicted RBP14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 PTGER1P34995 402 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 ST13P50502 369 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 SLC37A1P57057 533 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 RNF4P78317 190 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 FUT7Q11130 342 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 ZNF267Q14586 743 aaPredicted RBP14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 EBPQ15125 230 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 TLR1Q15399 786 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 ATG16L1Q676U5 607 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 C16orf47Q6ZP98 133 aaPredicted RBP14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 TICAM1Q8IUC6 712 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 MDS2Q8NDY4 140 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 NUBPLQ8TB37 319 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 THAP3Q8WTV1 239 aaPredicted RBP14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 CTHRC1Q96CG8 243 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 TSSK3Q96PN8 268 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 SIGLEC12Q96PQ1 595 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 MANSC1Q9H8J5 431 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 TRIM45Q9H8W5 580 aaPredicted RBP14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 SLC35C2Q9NQQ7 365 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 TAS2R7Q9NYW3 318 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 ABI3Q9P2A4 366 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 ZNF639Q9UID6 485 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 ENTPD4Q9Y227 616 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 ZNF780BQ9Y6R6 833 aa14.38□□□□□ -0.11
RABGGTA-219ENST00000560871 TRAV17A0A0B4J275 112 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 TCP11X1B4DZS4 312 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 FCHO1O14526 889 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 TBX19O60806 448 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 ITGA10O75578 1167 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 NEURL1O76050 574 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 BCKDHAP12694 445 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 NT5EP21589 574 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 SSTR4P31391 388 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 CD96P40200 585 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 PPP2R2AP63151 447 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 MAP4K2Q12851 820 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 PDE7AQ13946 482 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 LTB4RQ15722 352 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 ATP6AP1LQ52LC2 224 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 ZNF628Q5EBL2 1059 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 RNF111Q6ZNA4 994 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 ZNF227Q86WZ6 799 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 SAMD14Q8IZD0 417 aaPredicted RBP14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 VWA5B2Q8N398 1253 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 CISD2Q8N5K1 135 aaKnown RBP14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 ZNF615Q8N8J6 731 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 FNDC5Q8NAU1 212 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 CLHC1Q8NHS4 586 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 ZNF675Q8TD23 568 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 TUBGCP3Q96CW5 907 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 LIN28AQ9H9Z2 209 aaKnown RBP14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 MIEF1Q9NQG6 463 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 PFDN4Q9NQP4 134 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 ASF1BQ9NVP2 202 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 ANKRD10Q9NXR5 420 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 ASIC5Q9NY37 505 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 MYOTQ9UBF9 498 aa14.37□□□□□ -0.11
RABGGTA-219ENST00000560871 NBASA2RRP1 2371 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 OR6C76A6NM76 312 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 MYO1GB0I1T2 1018 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms