RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 IFI6P09912 130 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 NQO1P15559 274 aaKnown RBP13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 GPR143P51810 404 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 XKP51811 444 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 RPL38P63173 70 aaKnown RBP13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 KCNJ2P63252 427 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 RFTN2Q52LD8 501 aaPredicted RBP13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 R3HCC1LQ7Z5L2 792 aaKnown RBP13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 GALNT12Q8IXK2 581 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 LRRC25Q8N386 305 aaPredicted RBP13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 OR2T11Q8NH01 316 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 HAS2Q92819 552 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 KLHL29Q96CT2 875 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 TUBGCP3Q96CW5 907 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 BBC3Q96PG8 261 aaPredicted RBP13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 EBPLQ9BY08 206 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 DEFB126Q9BYW3 111 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 MEAF6Q9HAF1 191 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 ASIC5Q9NY37 505 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 ARMCX1Q9P291 453 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 ENTPD4Q9Y227 616 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 CFL2Q9Y281 166 aa13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 POLR3HQ9Y535 204 aaPredicted RBP13.04□□□□□ -0.32
PKNOX1-209ENST00000560448 DOCK10Q96BY6 2186 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 GLOD5A6NK44 160 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 DIAPH2O60879 1101 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 SKAP2O75563 359 aaPredicted RBP13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 BCAS2O75934 225 aaPredicted RBP13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 IGKV3-11P04433 115 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 MPIP34949 423 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 ALDH9A1P49189 494 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 TLR1Q15399 786 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 ACER2Q5QJU3 275 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 C6orf136Q5SQH8 315 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 METTL21CQ5VZV1 264 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 B3GNTL1Q67FW5 361 aaPredicted RBP13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 FAM71E1Q6IPT2 247 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 HSDL2Q6YN16 418 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 RPS19BP1Q86WX3 136 aaKnown RBP13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 HORMAD2Q8N7B1 307 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 FNDC5Q8NAU1 212 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 OR7G1Q8NGA0 311 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 NUBPLQ8TB37 319 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 SLC2A12Q8TD20 617 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 NCLNQ969V3 563 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 PNPLA2Q96AD5 504 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 SENP5Q96HI0 755 aaPredicted RBP13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 SLC35C2Q9NQQ7 365 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 STMN3Q9NZ72 180 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 NOP53Q9NZM5 478 aaKnown RBP13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 PTGFRNQ9P2B2 879 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 EIF3LQ9Y262 564 aaKnown RBP13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 B3GNT3Q9Y2A9 372 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 PCDHGB6Q9Y5F9 930 aa13.03□□□□□ -0.32
PKNOX1-209ENST00000560448 COL6A6A6NMZ7 2263 aa13.02□□□□□ -0.32
PKNOX1-209ENST00000560448 TRBV11-1A0A0K0K1C0 115 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 B8ZZF3 427 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 PRKRAO75569 313 aaKnown RBP13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 ERAL1O75616 437 aaKnown RBP13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 DDAH2O95865 285 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 JUNP05412 331 aaKnown RBP13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 SDC1P18827 310 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 CALB2P22676 271 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 CASRP41180 1078 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 ERVK-8P63133 956 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 PSPHP78330 225 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 EMX2Q04743 252 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 C2orf80Q0P641 193 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 C19orf57Q0VDD7 668 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 FUT7Q11130 342 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 MAP4K2Q12851 820 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 OGFOD2Q6N063 350 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 Q6ZS92 163 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 OR4N5Q8IXE1 308 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 GPALPP1Q8IXQ4 340 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 KIF2BQ8N4N8 673 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 SIRT6Q8N6T7 355 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 C17orf47Q8NEP4 570 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 ZNF675Q8TD23 568 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 ZNF721Q8TF20 911 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 UTP4Q969X6 686 aaKnown RBP13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 MAELQ96JY0 434 aaKnown RBP13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 ZNF681Q96N22 645 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 OR52B2Q96RD2 323 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 CCDC28BQ9BUN5 200 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 OR8D2Q9GZM6 311 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 CXorf21Q9HAI6 301 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 ZNF71Q9NQZ8 489 aaPredicted RBP13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 HEMK1Q9Y5R4 338 aaPredicted RBP13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 PTGDR2Q9Y5Y4 395 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 CHD6Q8TD26 2715 aa13.02□□□□□ -0.33
PKNOX1-209ENST00000560448 CPAMD8Q8IZJ3 1885 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 OR5H15A6NDH6 313 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 A8MUA0 341 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 A8MUI8 341 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 H0YHG0 523 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 MASP2O00187 686 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 PEX11AO75192 247 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 PDGFAP04085 211 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 NTSP30990 170 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms