RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 IDH3AP50213 366 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 GPR143P51810 404 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 ALDH18A1P54886 795 aaKnown RBP12.6□□□□□ -0.39
SMAD3-214ENST00000560402 LAPTM5Q13571 262 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 SERTAD2Q14140 314 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 CDSNQ15517 529 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 PAGE2BQ5JRK9 111 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 CES4AQ5XG92 561 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 SULT1C3Q6IMI6 304 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 ABHD17CQ6PCB6 329 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 EPGNQ6UW88 154 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 FRMD7Q6ZUT3 714 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 MORN4Q8NDC4 146 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 SRFBP1Q8NEF9 429 aaKnown RBP12.6□□□□□ -0.39
SMAD3-214ENST00000560402 OR14A16Q8NHC5 309 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 ASB15Q8WXK1 588 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 PTCD3Q96EY7 689 aaKnown RBP12.6□□□□□ -0.39
SMAD3-214ENST00000560402 KCNC2Q96PR1 638 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 TMEM79Q9BSE2 394 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 C20orf27Q9GZN8 174 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 ZNF395Q9H8N7 513 aaPredicted RBP12.6□□□□□ -0.39
SMAD3-214ENST00000560402 TCF7L2Q9NQB0 619 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 NUDT4Q9NZJ9 180 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 TAGLN3Q9UI15 199 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 DAPP1Q9UN19 280 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 ERVK-11Q9UQG0 969 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 CLCA3PQ9Y6N3 262 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 SPACA6W5XKT8 324 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 HCFC1P51610 2035 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 CELSR1Q9NYQ6 3014 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 CCDC168Q8NDH2 2452 aa12.6□□□□□ -0.39
SMAD3-214ENST00000560402 A0A0G2JN53 185 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 NCF1BA6NI72 391 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-214ENST00000560402 NCF1CA8MVU1 366 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-214ENST00000560402 TGFBR3LH3BV60 316 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 SLC22A2O15244 555 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 CDC40O60508 579 aaKnown RBP eCLIP12.59□□□□□ -0.39
SMAD3-214ENST00000560402 CRCPO75575 148 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 STK16O75716 305 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 SUPT7LO94864 414 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 NCF1P14598 390 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-214ENST00000560402 CERS1P27544 350 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 ADSLP30566 484 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-214ENST00000560402 CHRNB4P30926 498 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 GDF5P43026 501 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 KIR3DL1P43629 444 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 HNRNPFP52597 415 aaKnown RBP12.59□□□□□ -0.39
SMAD3-214ENST00000560402 PLA2G16P53816 162 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 LIM2P55344 173 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 DNAL1Q4LDG9 190 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 SH2D4BQ5SQS7 431 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 HSDL2Q6YN16 418 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 GK5Q6ZS86 529 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 NCCRP1Q6ZVX7 275 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-214ENST00000560402 LRRC70Q7Z2Q7 622 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 GPSM1Q86YR5 675 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 PTGR2Q8N8N7 351 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-214ENST00000560402 PDPRQ8NCN5 879 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 OR8K3Q8NH51 312 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 MCUR1Q96AQ8 359 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 CMTM5Q96DZ9 223 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 PHF21BQ96EK2 531 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 NMUR2Q9GZQ4 415 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 LYRM4Q9HD34 91 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 RYDENQ9NUL5 291 aaKnown RBP12.59□□□□□ -0.39
SMAD3-214ENST00000560402 MYOTQ9UBF9 498 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 TNPO3Q9Y5L0 923 aaKnown RBP12.59□□□□□ -0.39
SMAD3-214ENST00000560402 DNAJC13O75165 2243 aa12.59□□□□□ -0.39
SMAD3-214ENST00000560402 ZNF407Q9C0G0 2248 aa12.58□□□□□ -0.39
SMAD3-214ENST00000560402 CYR61O00622 381 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 GYG2O15488 501 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 TAPBPO15533 448 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 CTNSO60931 367 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 TBX6O95947 436 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-214ENST00000560402 CHEK2O96017 543 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 IFNA16P05015 189 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 CHRNGP07510 517 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 NCF2P19878 526 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-214ENST00000560402 POU3F2P20265 443 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-214ENST00000560402 PRDX6P30041 224 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 PPP2R1BP30154 601 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 SERPINB1P30740 379 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 RFC3P40938 356 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 RIPPLY3P57055 190 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 GPR85P60893 370 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 IRX1P78414 480 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-214ENST00000560402 MXRA7P84157 204 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 STX4Q12846 297 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 E2F2Q14209 437 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 HIST2H2ACQ16777 129 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-214ENST00000560402 C18orf21Q32NC0 220 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-214ENST00000560402 XKR6Q5GH73 641 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 ZNF678Q5SXM1 525 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 NDUFAF5Q5TEU4 345 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 HIST2H2AA3Q6FI13 130 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 C3P1Q6ZMU1 363 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 MEX3BQ6ZN04 569 aaKnown RBP12.58□□□□□ -0.4
SMAD3-214ENST00000560402 ASRGL1Q7L266 308 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 MDGA2Q7Z553 956 aa12.58□□□□□ -0.4
SMAD3-214ENST00000560402 VN1R5Q7Z5H4 357 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms