RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 HKDC1Q2TB90 917 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 ZNF699Q32M78 642 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 LRIT3Q3SXY7 679 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 UNC50Q53HI1 259 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 HSP90AA5PQ58FG0 334 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 IL23RQ5VWK5 629 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 BSPRYQ5W0U4 402 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 WDR25Q64LD2 544 aaPredicted RBP1.37□□□□□ -2.19
USP3-209ENST00000558925 HIST2H2AA3Q6FI13 130 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 PNCKQ6P2M8 343 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 FAM159AQ6UWV7 190 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 ADAMTSL5Q6ZMM2 481 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 FRRS1Q6ZNA5 592 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 CDHR3Q6ZTQ4 885 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 ZER1Q7Z7L7 766 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 ZNF573Q86YE8 665 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.37□□□□□ -2.19
USP3-209ENST00000558925 LINC00518Q8N0U6 118 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 LSMEM2Q8N112 164 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 CERS5Q8N5B7 392 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 ARFGAP2Q8N6H7 521 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 BCORP1Q8N888 145 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 MLKLQ8NB16 471 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 OR4F17Q8NGA8 305 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 OR52B6Q8NGF0 335 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 OR2T34Q8NGX1 318 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 RDH11Q8TC12 318 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 MRGPRDQ8TDS7 321 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 SSC4DQ8WTU2 575 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 TCP11Q8WWU5 503 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 TMEM37Q8WXS4 190 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 SLCO2A1Q92959 643 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 HIST1H2ACQ93077 130 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 NABP1Q96AH0 204 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 RAB7BQ96AH8 199 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 ART5Q96L15 291 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 RCHY1Q96PM5 261 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 OR4F4Q96R69 305 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 KRT12Q99456 494 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 DCTN5Q9BTE1 182 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 APOOQ9BUR5 198 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 CARD6Q9BX69 1037 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 TEX13BQ9BXU2 312 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 LRRCC1Q9C099 1032 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 ATG10Q9H0Y0 220 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 WDR41Q9HAD4 459 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 ADGRL4Q9HBW9 690 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 B3GAT2Q9NPZ5 323 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 POLE3Q9NRF9 147 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 ZNF446Q9NWS9 450 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 C2orf42Q9NWW7 574 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 TEX10Q9NXF1 929 aaPredicted RBP1.37□□□□□ -2.19
USP3-209ENST00000558925 GDAP2Q9NXN4 497 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 RDH8Q9NYR8 311 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 TAS2R16Q9NYV7 291 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 TMOD2Q9NZR1 351 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 THAP10Q9P2Z0 257 aaPredicted RBP1.37□□□□□ -2.19
USP3-209ENST00000558925 ERVK-18Q9QC07 812 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 EPS15L1Q9UBC2 864 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 FOXJ3Q9UPW0 622 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 MGAT4BQ9UQ53 548 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 ZHX2Q9Y6X8 837 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 U3KQV3 271 aa1.37□□□□□ -2.19
USP3-209ENST00000558925 TDRD15B5MCY1 1934 aaKnown RBP1.36□□□□□ -2.19
USP3-209ENST00000558925 A0A1B0GUL7 405 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 IGLON5A6NGN9 336 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 ANKRD30BLA7E2S9 258 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 WASHC1A8K0Z3 465 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 MPTX1A8MV57 137 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 WASH3PC4AMC7 463 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 K7EQG2 157 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 K7ERI5 159 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 FBP2O00757 339 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 PDXKO00764 312 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 SDHDO14521 159 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 CCSO14618 274 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 IMPA2O14732 288 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 CHEK1O14757 476 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 INPP4BO15327 924 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 RANBP6O60518 1105 aaKnown RBP1.36□□□□□ -2.19
USP3-209ENST00000558925 TSPAN2O60636 221 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 SNAP91O60641 907 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 TOM1L1O75674 476 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 TM7SF2O76062 418 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 STK17BO94768 372 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 GOT2P00505 430 aaKnown RBP1.36□□□□□ -2.19
USP3-209ENST00000558925 IGKV3-20P01619 116 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 IGLV1-44P01699 117 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 FCER2P06734 321 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 ANXA4P09525 319 aaPredicted RBP1.36□□□□□ -2.19
USP3-209ENST00000558925 CCDC159P0C7I6 412 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 OR9G9P0C7N8 305 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 RRASP10301 218 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 HSPA5P11021 654 aaKnown RBP1.36□□□□□ -2.19
USP3-209ENST00000558925 MBL2P11226 248 aaPredicted RBP1.36□□□□□ -2.19
USP3-209ENST00000558925 KRT13P13646 458 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 UCP1P25874 307 aa1.36□□□□□ -2.19
USP3-209ENST00000558925 CALRP27797 417 aaKnown RBP1.36□□□□□ -2.19
USP3-209ENST00000558925 FCGR2BP31994 310 aaPredicted RBP1.36□□□□□ -2.19
USP3-209ENST00000558925 FCGR2CP31995 323 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms