RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 HHATQ5VTY9 493 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 IL20RBQ6UXL0 311 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 MDGA2Q7Z553 956 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 ZNF781Q8N8C0 355 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 CLHC1Q8NHS4 586 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.83□□□□□ -0.362e-7■■■□□ 18
TSPAN3-205ENST00000558745 NUDT8Q8WV74 236 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 PPP1R36Q96LQ0 422 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 SORT1Q99523 831 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 FAIM2Q9BWQ8 316 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 BRINP2Q9C0B6 783 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 PFDN4Q9NQP4 134 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 C1orf109Q9NX04 203 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 MYOTQ9UBF9 498 aa12.83□□□□□ -0.36
TSPAN3-205ENST00000558745 RELNP78509 3460 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 MYO9AB2RTY4 2548 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 GOLGA6L10A6NI86 522 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 LSM1O15116 133 aaKnown RBP12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 PEX11AO75192 247 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 LRATO95237 230 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 CHEK2O96017 543 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 SP1P08047 785 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 DRD2P14416 443 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 S1PR1P21453 382 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 PRPH2P23942 346 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 SERPINB5P36952 375 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 SOX3P41225 446 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 SLC1A6P48664 564 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 CYB561P49447 251 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 HLCSP50747 726 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 SLC37A1P57057 533 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 RPL38P63173 70 aaKnown RBP12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 MRPS35P82673 323 aaKnown RBP12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 DUSP8Q13202 625 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 MRPL49Q13405 166 aaKnown RBP12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 EXOSC7Q15024 291 aaKnown RBP12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 MAPKAPK3Q16644 382 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 SPRED3Q2MJR0 410 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 PRICKLE4Q2TBC4 344 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 TRMT12Q53H54 448 aaKnown RBP12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 TTMPQ5BVD1 217 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 FAM71E1Q6IPT2 247 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 SLC25A25Q6KCM7 469 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 ANKRD26P1Q6NSI1 321 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 TMEM64Q6YI46 380 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 GALNTL5Q7Z4T8 443 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 TICAM1Q8IUC6 712 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 GALNT12Q8IXK2 581 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 LGI4Q8N135 537 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 ARMC10Q8N2F6 343 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 TMEM156Q8N614 296 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 SUN3Q8TAQ9 357 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 FBXL20Q96IG2 436 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 GAL3ST4Q96RP7 486 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 RASL10BQ96S79 203 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 PELOQ9BRX2 385 aaKnown RBP12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 PNPOQ9NVS9 261 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 COPS7AQ9UBW8 275 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 YARS2Q9Y2Z4 477 aaKnown RBP12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 ZNF780BQ9Y6R6 833 aa12.82□□□□□ -0.36
TSPAN3-205ENST00000558745 RP1L1Q8IWN7 2480 aaPredicted RBP12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 NBPF19A0A087WUL8 3843 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 SYNDIG1LA6NDD5 238 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 FCHO1O14526 889 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 AKAP10O43572 662 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 CSNK2A2P19784 350 aaPredicted RBP12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 GALNSP34059 522 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 TRHRP34981 398 aaPredicted RBP12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 SSR4P51571 173 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 ZNF763Q0D2J5 394 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 BST1Q10588 318 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 STX3Q13277 289 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 HEPACAMQ14CZ8 416 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 PDCD2Q16342 344 aaPredicted RBP12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 RPUSD3Q6P087 351 aaKnown RBP12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 RNF111Q6ZNA4 994 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 ZNF615Q8N8J6 731 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 OR5L2Q8NGL0 311 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 KAT2AQ92830 837 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 SCMH1Q96GD3 660 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 TSSK3Q96PN8 268 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 C1orf50Q9BV19 199 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 STMN4Q9H169 189 aaPredicted RBP12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 OR10A5Q9H207 317 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 SLC35C2Q9NQQ7 365 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 MAT2BQ9NZL9 334 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 PSME2Q9UL46 239 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 DTX4Q9Y2E6 619 aa12.81□□□□□ -0.36
TSPAN3-205ENST00000558745 SVILO95425 2214 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 TMEM114B3SHH9 223 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 NPIPB8E9PQR5 432 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 DYRK3O43781 588 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 VPS4BO75351 444 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 SLC25A12O75746 678 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 SASH3O75995 380 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 RASAL1O95294 804 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 NADKO95544 446 aaPredicted RBP12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 CD46P15529 392 aa12.8□□□□□ -0.36
TSPAN3-205ENST00000558745 PCSK2P16519 638 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms